| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183076
Identifier: 189183076
GI number: 189183076
Start: 164258
End: 164770
Strand: Reverse
Name: 189183076
Synonym: OTT_0169
Alternate gene names: NA
Gene position: 164770-164258 (Counterclockwise)
Preceding gene: 189183077
Following gene: 189183074
Centisome position: 8.2
GC content: 31.38
Gene sequence:
>513_bases ATGAATCTAACTAATAAAGAAAACTGTAGCATAGAACATTTAGTTCAAGATGGAATCAAAAAAATTAAGGAAAATTTGCC ACCTTTAACTGAAGATCAACAAAAAAGGCTGAAAGCGTTTGATAAGAACGTTCTTGATTTGTTTAAACGTCAAGAAGGTA AGAAAAAGTCAAAAAATTTGAAAGGTACACTTATGTACTATGTTACAGAATTTGTTAATTTTGTAACAACATGCATTAGC TGTGCTAATTGGAGAAAAGAGCAAAAGGTACAAGCAGAATATGATGTGTATGCTTTTGCAAGAGGTGTAGAGAAAGCACT AGAGGAGATTAAAAATAAAAAAGATAATTTAAAAGCCATGCAATCAATAACTATGCCTAATACAGCTAGAGTTGCACGTA CTATAGAAAATGTAATTGAGGAAGCTCAAAAGCAACAACAAAGTTATTCTTTTGTTGAGCGTGAAAACAATAGGCCTAAA AAAAATCCTAAAAGCAACTGCAGAGAACCTTAA
Upstream 100 bases:
>100_bases GCTGTTAATACTAATAAAAGTAATTATGAGATTAAAGATTAGCAAAAGGAAATAAAAATATAGTATAGTTGTAATATGTA ATAATTTATAGAGGGTGATT
Downstream 100 bases:
>100_bases GTAAGCTATTAGATAAACTGGTTATTATTTGTATGCTTTTGTATGCTATGGTATCTTGATTGTTCTTAATTATTTATCGA TAGAATTAGTTGACGCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MNLTNKENCSIEHLVQDGIKKIKENLPPLTEDQQKRLKAFDKNVLDLFKRQEGKKKSKNLKGTLMYYVTEFVNFVTTCIS CANWRKEQKVQAEYDVYAFARGVEKALEEIKNKKDNLKAMQSITMPNTARVARTIENVIEEAQKQQQSYSFVERENNRPK KNPKSNCREP
Sequences:
>Translated_170_residues MNLTNKENCSIEHLVQDGIKKIKENLPPLTEDQQKRLKAFDKNVLDLFKRQEGKKKSKNLKGTLMYYVTEFVNFVTTCIS CANWRKEQKVQAEYDVYAFARGVEKALEEIKNKKDNLKAMQSITMPNTARVARTIENVIEEAQKQQQSYSFVERENNRPK KNPKSNCREP >Mature_170_residues MNLTNKENCSIEHLVQDGIKKIKENLPPLTEDQQKRLKAFDKNVLDLFKRQEGKKKSKNLKGTLMYYVTEFVNFVTTCIS CANWRKEQKVQAEYDVYAFARGVEKALEEIKNKKDNLKAMQSITMPNTARVARTIENVIEEAQKQQQSYSFVERENNRPK KNPKSNCREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19862; Mature: 19862
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTNKENCSIEHLVQDGIKKIKENLPPLTEDQQKRLKAFDKNVLDLFKRQEGKKKSKNL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGTLMYYVTEFVNFVTTCISCANWRKEQKVQAEYDVYAFARGVEKALEEIKNKKDNLKAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QSITMPNTARVARTIENVIEEAQKQQQSYSFVERENNRPKKNPKSNCREP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLTNKENCSIEHLVQDGIKKIKENLPPLTEDQQKRLKAFDKNVLDLFKRQEGKKKSKNL CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KGTLMYYVTEFVNFVTTCISCANWRKEQKVQAEYDVYAFARGVEKALEEIKNKKDNLKAM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QSITMPNTARVARTIENVIEEAQKQQQSYSFVERENNRPKKNPKSNCREP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA