| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183019
Identifier: 189183019
GI number: 189183019
Start: 109258
End: 110124
Strand: Direct
Name: 189183019
Synonym: OTT_0112
Alternate gene names: NA
Gene position: 109258-110124 (Clockwise)
Preceding gene: 189183018
Following gene: 189183020
Centisome position: 5.44
GC content: 28.37
Gene sequence:
>867_bases ATGGCAAGAAGATACAGTTATGATTTAAGAATGAAGATATTCAAAGAGGTAGATGATGGACTATCAATTGTTAAAGCATG TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAAAGGGAAACAGGAGATATTAAAGCAAAAC CTTATGGGCCAGCCAAAGGTTATAATGCAAAAAAAGATCTCAAAGAATTTGAGGAGTTAATTATCAATCATCATGATAAA ACATCTAAAGAATTAAGTATTATACTAGGTAATAGATTACAAAGCACTAGAATAAATTATTATAGAAAACTACTAGGATA CACTTATAAAAAAACTAATCTTCATTCCAAAAGGGATATTGTGTTAAGGAATGAATTTATCGAGAAGGTAAAGCAAATTT CTAAAGAAAATCTAGTATTTATTGATGAGTTAGGAATAGAGGATAATGCTTGTAGAGAATATGGATGGAGTATAAAAGGT ACTAGATGTTATGGCAATAAAGCTTATCAACATAAATCCAGGGTCAGTATGATAGCAGGGCTTTGTAATAATCAAATTAT AGCACCAGTAATATTTGAAGGAAATTGTAATAAAGCAATATTTACAACTTATGTAGAAACTATATTAATCAAAGAATTGC GTCCTGGACAAATAGTAATTATGGATAATATCAACTTTCATAAGAATACTATAATTAAAGTATTAATAGAATCGGTTGGC TGCAGTATTCTATTCTTACCTACATATAGTCCAGATTTAAATCCTATAGAACATTATTGGTTTAAGATTAAGAACGAAAT AAGAAAAGTTACTGCTCAATTCAAAGATATTAGCATTGCTGTAGAACACGTAATGAAGTTTATCTGA
Upstream 100 bases:
>100_bases TAGCAATCGCTCGGGTTATTACAGTAGTATAGCACGAACGTAGGAAATATGTACATAATATGCTAATATGAAAAGAGTAT AAAAAAAAAATAGATAAATA
Downstream 100 bases:
>100_bases TTGTACCTATTTCCTACGTTATTGCTATACCTTAGAGAATACCGTACTTGTTTCCATATAGGTCAGAACTATGGGATTAG TGAAAGTTCAGCATATAAAG
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MARRYSYDLRMKIFKEVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKKDLKEFEELIINHHDK TSKELSIILGNRLQSTRINYYRKLLGYTYKKTNLHSKRDIVLRNEFIEKVKQISKENLVFIDELGIEDNACREYGWSIKG TRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTAQFKDISIAVEHVMKFI
Sequences:
>Translated_288_residues MARRYSYDLRMKIFKEVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKKDLKEFEELIINHHDK TSKELSIILGNRLQSTRINYYRKLLGYTYKKTNLHSKRDIVLRNEFIEKVKQISKENLVFIDELGIEDNACREYGWSIKG TRCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTAQFKDISIAVEHVMKFI >Mature_287_residues ARRYSYDLRMKIFKEVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKKDLKEFEELIINHHDKT SKELSIILGNRLQSTRINYYRKLLGYTYKKTNLHSKRDIVLRNEFIEKVKQISKENLVFIDELGIEDNACREYGWSIKGT RCYGNKAYQHKSRVSMIAGLCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVGC SILFLPTYSPDLNPIEHYWFKIKNEIRKVTAQFKDISIAVEHVMKFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33680; Mature: 33549
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRYSYDLRMKIFKEVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKKDLKEFEELIINHHDKTSKELSIILGNRLQSTRINYYRKLLGYTYKKTNLHSKRDI CCHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH VLRNEFIEKVKQISKENLVFIDELGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTAQFKDISIAVEHVMKFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ARRYSYDLRMKIFKEVDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKKDLKEFEELIINHHDKTSKELSIILGNRLQSTRINYYRKLLGYTYKKTNLHSKRDI CCHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCH VLRNEFIEKVKQISKENLVFIDELGIEDNACREYGWSIKGTRCYGNKAYQHKSRVSMIAG HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEECCHHHHHHHHHHHHHH LCNNQIIAPVIFEGNCNKAIFTTYVETILIKELRPGQIVIMDNINFHKNTIIKVLIESVG HHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHC CSILFLPTYSPDLNPIEHYWFKIKNEIRKVTAQFKDISIAVEHVMKFI CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA