| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183018
Identifier: 189183018
GI number: 189183018
Start: 106106
End: 108577
Strand: Direct
Name: 189183018
Synonym: OTT_0111
Alternate gene names: NA
Gene position: 106106-108577 (Clockwise)
Preceding gene: 189183017
Following gene: 189183019
Centisome position: 5.28
GC content: 27.87
Gene sequence:
>2472_bases TTGTTTAAATTAAATATTGTATATATTACACGTTTACTAAAAAGTATTCAATCAGTGAAAAAAAGAAATACTAATAAATA TAACAAAGTTATTCAAATTAAAAAGCAAGATATAGCTACTACTCAACAACAACTAATGAAAATAACGCCTATATATGAGA ATCATGTGCGGTGGATATATCAAGATAGCACGGTAATAATATCAGTTCTTGCACATTTAGTAAAAACTAAAAATAGCGAA TTGTCACAGATCATAGAATCACAAATTCATAACATAAAACAGAACTGCGTTGCATTTGAATCTATAATTGAATCTATGCT TATACGTGCAAATGTAAATTTAAATTTAGTAGAAAATCAATTTATTGTAACATTGCTAGAAAAACTAGCTCCATTCACTC TAGAAAACATATTTGATAAAAAAAAAGAGTATTGTAGTTTTTTAGACTATATATTAGCATCTGCTTTTGAGAATAAGAAC AAAGAACTGCTATCTCTTGTCATAAAAAACCATAGTGAAAAAATAAATATGGATATGGCGTTAGATATGGCTGTTCAATA TAACTTTAGCAGTGCTATAGCTATGTTACCACAAGATAAAATAACTAAAACAGCTATGACAAAAGCTATAGCAGATTCGA AAAGACTGAACTATGCTGCAGTTGCAAAAGCTTTAGGCTGTACTATTAATGTTAAGAAAAAATCAGAAACGTTACATACA CAGTATAAAATAACATCTAAGCAGCATGCAAAAATAGTAAAGTGGGTGGATAAGGAAGTACTAGATGATGCGTTATTTTC ATATAACAATTATGATGCTCTAATATCTGATTGTTTTAAAGTGATGCATTCTTGTAATAAACATGAAATTAATAACTTTA TTGACGAATGTATAGCATATCTAACATCCAAAAATAATAATGATGAACGGAATGCATATACAAAATATGCGATTATTTGC CTTATAAAAATTTCACATGCTTTTATACTTACTACTAGTACTGCTGAACGTATTGTTGAAGTTGTATCTCCTATTTTAGA ACAAAATGAATATTGGTATCCTCTGGTATCGCTTTATATAAACAAACATGATATAGATAGCTTGCGTAAAGCAGTTGAAG CTACTGTTAAAATGAGTAAAACAGAAGAAGAAACTAATCGCAATAAGTTGTTAGGGATATTGAAATGCAAAGTACTAACT CAACCACAGAATTGGCATGAATATTTAGATAAATTTCCAGATACCATCAAAAAACTTTCTACTACAATATATAGAACACT TACAACTAGTGTTTTATGTGAAAAAATTGCAAGTCTATTATCTCAAAATAATAAGGAAGATGCTTGCAAATATATAAAAG ATTTACCAGAAAAATCACTTGTACAGGATCTTTTGCAGTTAGAATACAACTTAAAATTTGATAGTAGTTTTGATTATACA ATCCCAAATGCTGTAACTACTATTGAAACTATAATAGATAGAATTGATGACAAAAAAACTCATCCTATGTCAAAGCCTAC CATATATTTAATACTTTATAGAATTCTAAACCATTATTATGAATATTATAGTAGTCTCAATAACTGTGAACAATATAACA ATACGTTAAAAATCATAAAAATCTTAAAATCGTATACTAAATCTGAACAAAAAGTCTGCCTATCAAAATATACAGATAAT ATGCTAAGTCTAATTGATGATGTGGTAAAAAAAAGTATTATCATATCTACAAAAGACAAAATAAATTATGAAAATAACTT AAGTCAAGAAGAAATGGCGCTTAAACAGAAAGCTAATAAGGACTGTACTATATCTTCTCAAGATCTTCTAGATAATGAAA ACATACATAACATAGACACAGAAAAACACTCAGATAATTTATTTGCACATACTTTAGATAACAAACATGATCTGATTGAG TTTTATAAAGAATCGGCCTCAATTAACAAAGAACACAAAACACTGTTTACGCAACATAGGAAACACCAGCATATCCATTG GCATATCAAAAACCAAACCTATTGTGCTTTTGATGATGATATAAAACAAGTTGTATGGCACAACAAAATTTACTATTGCA CTATTGATAAGGATCTTAAATTAGATAGAAAATACAATGATTTTTTAAAGGCTTTAGATAAAGGATTCGCTTTATCAGAA ACAGGAAAGTCAGGAATAAAGTACCTTAAAACAAGCAAAATGTTTGAATTAAAAGTTGCAGGAAAGGATTATAGATTAGT TGCAGACGAAATACATGAAAATATTAAAAATAACAGTTTTATCATTTTTAATAAAGAACTCAATCATAAAGAAGTATCTA AAATGATTCAAAATAATAATACAGCCAATTCTAGCATCTGTCTTTCTCATATGGTATGTAACGACTGTAATGATGGAGTA GATAATAATAGCCTTATGCTAAAAGACTTCAACAAATGCTGCATTGGAGAAATACTTGATACTCTTGAATAG
Upstream 100 bases:
>100_bases ATTATGTTGTGTTAAGAGGCATACAACCATTACTCTGCCTATATTTTAGTATATTTTTTACGTCAAACTTAAAATTTCTT TATATATTTTTCTTGAGTAT
Downstream 100 bases:
>100_bases CAATTTATCCAAACATCTACTTCTCTAAAGAAAAGAAAGGAATGGAATAATTTTGTAATTAGAAGATATAAATATGGAGA GATATATAGTCATTTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV DNNSLMLKDFNKCCIGEILDTLE
Sequences:
>Translated_823_residues MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV DNNSLMLKDFNKCCIGEILDTLE >Mature_823_residues MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV DNNSLMLKDFNKCCIGEILDTLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95597; Mature: 95597
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIY CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCHHCCCEEEE QDSTVIISVLAHLVKTKNSELSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQ CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH FIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKNKELLSLVIKNHSEKINMDMA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHE LDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT EHHHEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHHHH QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAY HEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LTSKNNNDERNAYTKYAIICLIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYI HHCCCCCCCHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHHHHCCCCCEEHHHHHC NKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLTQPQNWHEYLDKFPDTIKKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHH TTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIK CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKSYTKSEQKVCLSKYTDNMLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHCCC DCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIEFYKESASINKEHKTLFTQHR CCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH KHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE CCCCEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNN CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC TANSSICLSHMVCNDCNDGVDNNSLMLKDFNKCCIGEILDTLE CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIY CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCHHCCCEEEE QDSTVIISVLAHLVKTKNSELSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQ CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH FIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKNKELLSLVIKNHSEKINMDMA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHE LDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT EHHHEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHHHH QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAY HEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LTSKNNNDERNAYTKYAIICLIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYI HHCCCCCCCHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHHHHCCCCCEEHHHHHC NKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLTQPQNWHEYLDKFPDTIKKLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHH TTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIK CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKSYTKSEQKVCLSKYTDNMLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHCCC DCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIEFYKESASINKEHKTLFTQHR CCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH KHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE CCCCEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNN CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC TANSSICLSHMVCNDCNDGVDNNSLMLKDFNKCCIGEILDTLE CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA