Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183018

Identifier: 189183018

GI number: 189183018

Start: 106106

End: 108577

Strand: Direct

Name: 189183018

Synonym: OTT_0111

Alternate gene names: NA

Gene position: 106106-108577 (Clockwise)

Preceding gene: 189183017

Following gene: 189183019

Centisome position: 5.28

GC content: 27.87

Gene sequence:

>2472_bases
TTGTTTAAATTAAATATTGTATATATTACACGTTTACTAAAAAGTATTCAATCAGTGAAAAAAAGAAATACTAATAAATA
TAACAAAGTTATTCAAATTAAAAAGCAAGATATAGCTACTACTCAACAACAACTAATGAAAATAACGCCTATATATGAGA
ATCATGTGCGGTGGATATATCAAGATAGCACGGTAATAATATCAGTTCTTGCACATTTAGTAAAAACTAAAAATAGCGAA
TTGTCACAGATCATAGAATCACAAATTCATAACATAAAACAGAACTGCGTTGCATTTGAATCTATAATTGAATCTATGCT
TATACGTGCAAATGTAAATTTAAATTTAGTAGAAAATCAATTTATTGTAACATTGCTAGAAAAACTAGCTCCATTCACTC
TAGAAAACATATTTGATAAAAAAAAAGAGTATTGTAGTTTTTTAGACTATATATTAGCATCTGCTTTTGAGAATAAGAAC
AAAGAACTGCTATCTCTTGTCATAAAAAACCATAGTGAAAAAATAAATATGGATATGGCGTTAGATATGGCTGTTCAATA
TAACTTTAGCAGTGCTATAGCTATGTTACCACAAGATAAAATAACTAAAACAGCTATGACAAAAGCTATAGCAGATTCGA
AAAGACTGAACTATGCTGCAGTTGCAAAAGCTTTAGGCTGTACTATTAATGTTAAGAAAAAATCAGAAACGTTACATACA
CAGTATAAAATAACATCTAAGCAGCATGCAAAAATAGTAAAGTGGGTGGATAAGGAAGTACTAGATGATGCGTTATTTTC
ATATAACAATTATGATGCTCTAATATCTGATTGTTTTAAAGTGATGCATTCTTGTAATAAACATGAAATTAATAACTTTA
TTGACGAATGTATAGCATATCTAACATCCAAAAATAATAATGATGAACGGAATGCATATACAAAATATGCGATTATTTGC
CTTATAAAAATTTCACATGCTTTTATACTTACTACTAGTACTGCTGAACGTATTGTTGAAGTTGTATCTCCTATTTTAGA
ACAAAATGAATATTGGTATCCTCTGGTATCGCTTTATATAAACAAACATGATATAGATAGCTTGCGTAAAGCAGTTGAAG
CTACTGTTAAAATGAGTAAAACAGAAGAAGAAACTAATCGCAATAAGTTGTTAGGGATATTGAAATGCAAAGTACTAACT
CAACCACAGAATTGGCATGAATATTTAGATAAATTTCCAGATACCATCAAAAAACTTTCTACTACAATATATAGAACACT
TACAACTAGTGTTTTATGTGAAAAAATTGCAAGTCTATTATCTCAAAATAATAAGGAAGATGCTTGCAAATATATAAAAG
ATTTACCAGAAAAATCACTTGTACAGGATCTTTTGCAGTTAGAATACAACTTAAAATTTGATAGTAGTTTTGATTATACA
ATCCCAAATGCTGTAACTACTATTGAAACTATAATAGATAGAATTGATGACAAAAAAACTCATCCTATGTCAAAGCCTAC
CATATATTTAATACTTTATAGAATTCTAAACCATTATTATGAATATTATAGTAGTCTCAATAACTGTGAACAATATAACA
ATACGTTAAAAATCATAAAAATCTTAAAATCGTATACTAAATCTGAACAAAAAGTCTGCCTATCAAAATATACAGATAAT
ATGCTAAGTCTAATTGATGATGTGGTAAAAAAAAGTATTATCATATCTACAAAAGACAAAATAAATTATGAAAATAACTT
AAGTCAAGAAGAAATGGCGCTTAAACAGAAAGCTAATAAGGACTGTACTATATCTTCTCAAGATCTTCTAGATAATGAAA
ACATACATAACATAGACACAGAAAAACACTCAGATAATTTATTTGCACATACTTTAGATAACAAACATGATCTGATTGAG
TTTTATAAAGAATCGGCCTCAATTAACAAAGAACACAAAACACTGTTTACGCAACATAGGAAACACCAGCATATCCATTG
GCATATCAAAAACCAAACCTATTGTGCTTTTGATGATGATATAAAACAAGTTGTATGGCACAACAAAATTTACTATTGCA
CTATTGATAAGGATCTTAAATTAGATAGAAAATACAATGATTTTTTAAAGGCTTTAGATAAAGGATTCGCTTTATCAGAA
ACAGGAAAGTCAGGAATAAAGTACCTTAAAACAAGCAAAATGTTTGAATTAAAAGTTGCAGGAAAGGATTATAGATTAGT
TGCAGACGAAATACATGAAAATATTAAAAATAACAGTTTTATCATTTTTAATAAAGAACTCAATCATAAAGAAGTATCTA
AAATGATTCAAAATAATAATACAGCCAATTCTAGCATCTGTCTTTCTCATATGGTATGTAACGACTGTAATGATGGAGTA
GATAATAATAGCCTTATGCTAAAAGACTTCAACAAATGCTGCATTGGAGAAATACTTGATACTCTTGAATAG

Upstream 100 bases:

>100_bases
ATTATGTTGTGTTAAGAGGCATACAACCATTACTCTGCCTATATTTTAGTATATTTTTTACGTCAAACTTAAAATTTCTT
TATATATTTTTCTTGAGTAT

Downstream 100 bases:

>100_bases
CAATTTATCCAAACATCTACTTCTCTAAAGAAAAGAAAGGAATGGAATAATTTTGTAATTAGAAGATATAAATATGGAGA
GATATATAGTCATTTACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 823; Mature: 823

Protein sequence:

>823_residues
MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE
LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN
KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT
QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC
LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT
QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT
IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN
MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE
FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE
TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV
DNNSLMLKDFNKCCIGEILDTLE

Sequences:

>Translated_823_residues
MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE
LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN
KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT
QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC
LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT
QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT
IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN
MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE
FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE
TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV
DNNSLMLKDFNKCCIGEILDTLE
>Mature_823_residues
MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIYQDSTVIISVLAHLVKTKNSE
LSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQFIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKN
KELLSLVIKNHSEKINMDMALDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT
QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAYLTSKNNNDERNAYTKYAIIC
LIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYINKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLT
QPQNWHEYLDKFPDTIKKLSTTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT
IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIKILKSYTKSEQKVCLSKYTDN
MLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANKDCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIE
FYKESASINKEHKTLFTQHRKHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE
TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNNTANSSICLSHMVCNDCNDGV
DNNSLMLKDFNKCCIGEILDTLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95597; Mature: 95597

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIY
CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCHHCCCEEEE
QDSTVIISVLAHLVKTKNSELSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
FIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKNKELLSLVIKNHSEKINMDMA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHE
LDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT
EHHHEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHHHH
QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAY
HEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTSKNNNDERNAYTKYAIICLIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYI
HHCCCCCCCHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHHHHCCCCCEEHHHHHC
NKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLTQPQNWHEYLDKFPDTIKKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHH
TTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIK
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKSYTKSEQKVCLSKYTDNMLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHCCC
DCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIEFYKESASINKEHKTLFTQHR
CCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE
CCCCEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC
TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNN
CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
TANSSICLSHMVCNDCNDGVDNNSLMLKDFNKCCIGEILDTLE
CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKLNIVYITRLLKSIQSVKKRNTNKYNKVIQIKKQDIATTQQQLMKITPIYENHVRWIY
CEEEHHHHHHHHHHHHHHHHHCCCCHHHHHEEEHHHHHHHHHHHHHHHCCCHHCCCEEEE
QDSTVIISVLAHLVKTKNSELSQIIESQIHNIKQNCVAFESIIESMLIRANVNLNLVENQ
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
FIVTLLEKLAPFTLENIFDKKKEYCSFLDYILASAFENKNKELLSLVIKNHSEKINMDMA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHE
LDMAVQYNFSSAIAMLPQDKITKTAMTKAIADSKRLNYAAVAKALGCTINVKKKSETLHT
EHHHEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHHHH
QYKITSKQHAKIVKWVDKEVLDDALFSYNNYDALISDCFKVMHSCNKHEINNFIDECIAY
HEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTSKNNNDERNAYTKYAIICLIKISHAFILTTSTAERIVEVVSPILEQNEYWYPLVSLYI
HHCCCCCCCHHHHHHHHHHHHEEECCEEEEECHHHHHHHHHHHHHHHCCCCCEEHHHHHC
NKHDIDSLRKAVEATVKMSKTEEETNRNKLLGILKCKVLTQPQNWHEYLDKFPDTIKKLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHH
TTIYRTLTTSVLCEKIASLLSQNNKEDACKYIKDLPEKSLVQDLLQLEYNLKFDSSFDYT
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCC
IPNAVTTIETIIDRIDDKKTHPMSKPTIYLILYRILNHYYEYYSSLNNCEQYNNTLKIIK
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKSYTKSEQKVCLSKYTDNMLSLIDDVVKKSIIISTKDKINYENNLSQEEMALKQKANK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHCCC
DCTISSQDLLDNENIHNIDTEKHSDNLFAHTLDNKHDLIEFYKESASINKEHKTLFTQHR
CCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH
KHQHIHWHIKNQTYCAFDDDIKQVVWHNKIYYCTIDKDLKLDRKYNDFLKALDKGFALSE
CCCCEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC
TGKSGIKYLKTSKMFELKVAGKDYRLVADEIHENIKNNSFIIFNKELNHKEVSKMIQNNN
CCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
TANSSICLSHMVCNDCNDGVDNNSLMLKDFNKCCIGEILDTLE
CCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA