Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182974

Identifier: 189182974

GI number: 189182974

Start: 68777

End: 70705

Strand: Reverse

Name: 189182974

Synonym: OTT_0067

Alternate gene names: NA

Gene position: 70705-68777 (Counterclockwise)

Preceding gene: 189182975

Following gene: 189182973

Centisome position: 3.52

GC content: 29.03

Gene sequence:

>1929_bases
ATGATATATAAAATCTTCAGAACTTTACTACAATTAGTATTATTAGTAATATTTATTAATCCTTCAAATGCAGAGTGGCA
AAATTTAGACGATAGTGCAATAGAAATCAAAGCATGCAGTCTAGATATAGCAATTAATAAAGATGGATCAGAGGAATATT
CTGCTTATATGCATGCCAAAATTCTTAAAGATCAAGGTCGGATGTTTTTTGCTAGCTACCGTTTACCATATTTATATAGA
GAAAATATTGATACAATAAAAATATTAAAAGCTCAAACAATCTTAAATGGTAAAAAATATACTGTTTCTGCTGATTCTAT
AGAAGATAAACCATTAGCTGCTACAGGTCTTGACACTGATATCTATAGACAGATATCAGTAACTTTTCCCAAACTAGAAA
TTGGAACAGAAATATTTATAAAGTATAAGGTTACTTTTAAGTCTCCACTTGAAGGAGTCTATAGCTATATTTTAGGATTA
TTACCATATGGCTATCATAAAAAAATGCAAATCAATATTAATTCGAAATTACCATTGAATACTAAGATTAATGATCCATA
TTGCAAACTACGTGTTAATGCTAGTACTACAAAAATTAATAATGATGAACATACCAATTCTGTTAAAATAACGTTACTGA
AACCATTGACTAACCTGTTAAAAAATGAACCAAAAGATTCTGTTCTAAATGAACAATATGATACTTGGGTTTCTGTATCT
ACTATTAGTCAATGGGAAGAATTGGGAGATAAATTAAGTAAGGATTACTTTAAAGTTATTAATCAACCATTGCCAAAACT
ATTTGCAGCTATTTCTGAAGATGCAAAACAATATTCAAATTATACAGAACAAATTGACTTTGTTACTTCAACATTTAATG
AAAAAATACAATATATTCCAGGATGGCGTTCAACTAATGGCAAATTCATTCCTCGAGACTTGATTAAAGTTATGAACTCT
GAAAAAGGAGATTGTAGAGACTTTGTTGTTAGTATAGCGGCTATACTAAAAAGTATAGGATATAAAGTATATCCAGCTTT
AATCCGTGCAGGAGAAATCTTTACTGTGCCAGTATTACATCTTCCTAATTTTCATAGTTTTGATTATGTAATACTTAAAG
TGATTGATAAAGATGATAAGATATACTGGATTGATCCTTGCAATAGTTTAAGCATGGCTAATGGAATGTTTCCTAAGATT
GCTAATAGAATGGCATTAGTACTTGATCCAGAAAGATCAAGTTATGAACAAGTATCAAGTATTGATCCAAAACATTCACA
AATAATTCATGACAGTACTCTAGAAATAGAAGGTAATATAACTAATTGGAAAGGAGCAATAAGTTATATAGGAGAAAACT
CAGCTATTTCACTGCACAATAAATTGCTTTATATGTCTCAGCAACAAATTAAAGAATCATTTTTTAATGATATAAGTGGC
ATTTATTTAGAAGAGCATAATAAGAAAAATATAACTTTACCAAGTGTTAATTTGAAGCTGCCAAGAATAGTTAAGGATGG
GACCATTGAGTATGAATATAACACTGATTGCCAAATAAAGAAAACTAATGCAGGGCCTGTTTTATTTGCTTCTATAGGTT
ACAACTCAGTTTTTAACAATATAATCAGTGTTGCTCCAAAACAAATAGGAGATCTTTTTCTAGGTACTCCTCATACAAAT
TATAACAATCTTGTAATCAAGAATCTAAAACTTAAAAATATTGATCATCTTAACTACATAATCGATACTCCATGGATTTA
TGTTGAAAGATCATGCAAGCATCAAGGTGATGATACAGAAATCATATCTAAGATAGTTGTACGACAGTCTTTAATACCAA
ATAATGATTTAAAAAGTGATGTATATAAAAAGCTGAAGGATGATATTGAACAACACTTTAATAAAACTGCAATAGTTTTA
GTTGAGTGA

Upstream 100 bases:

>100_bases
ACAAAACTTTGAATCAATAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAAAGATACAGCATACTCTATTAAATAA
AGCAGCTATTAAGGTAACTT

Downstream 100 bases:

>100_bases
GATATCAAAAAAGCAACAAAGCTATAATGCATAATAATTAATAGTTCAATTTTATTACATTTAAAGTAAGAAAAATTGAA
TAAATTAATTGACATTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR
ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL
LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS
TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS
EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI
ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN
YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
VE

Sequences:

>Translated_642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR
ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL
LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS
TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS
EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI
ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN
YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
VE
>Mature_642_residues
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAKILKDQGRMFFASYRLPYLYR
ENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTDIYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGL
LPYGYHKKMQININSKLPLNTKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS
TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIPGWRSTNGKFIPRDLIKVMNS
EKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLHLPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKI
ANRMALVLDPERSSYEQVSSIDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNNIISVAPKQIGDLFLGTPHTN
YNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTEIISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVL
VE

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73405; Mature: 73405

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAK
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH
ILKDQGRMFFASYRLPYLYRENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTD
HHHCCCCEEEEECCCCEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEECCCCHH
IYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGLLPYGYHKKMQININSKLPLN
HHHEEEEECCEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
TKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS
CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCHHHCEEEHH
TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECC
GWRSTNGKFIPRDLIKVMNSEKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLH
CEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE
LPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKIANRMALVLDPERSSYEQVSS
CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHC
IDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG
CCCCHHHEEECCEEEEECCCCCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN
EEEEECCCCCEEECCCCCCCCCEEECCEEEEEECCCCEEEECCCCCEEEEECCHHHHHHH
IISVAPKQIGDLFLGTPHTNYNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTE
HHHHCCHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHH
IISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLVE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MIYKIFRTLLQLVLLVIFINPSNAEWQNLDDSAIEIKACSLDIAINKDGSEEYSAYMHAK
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHH
ILKDQGRMFFASYRLPYLYRENIDTIKILKAQTILNGKKYTVSADSIEDKPLAATGLDTD
HHHCCCCEEEEECCCCEEECCCCCEEEEEEEHHHCCCCEEEEECCCCCCCCCEECCCCHH
IYRQISVTFPKLEIGTEIFIKYKVTFKSPLEGVYSYILGLLPYGYHKKMQININSKLPLN
HHHEEEEECCEEECCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
TKINDPYCKLRVNASTTKINNDEHTNSVKITLLKPLTNLLKNEPKDSVLNEQYDTWVSVS
CCCCCCEEEEEEECCEEECCCCCCCCEEEEEEEHHHHHHHHCCCCHHHHCCHHHCEEEHH
TISQWEELGDKLSKDYFKVINQPLPKLFAAISEDAKQYSNYTEQIDFVTSTFNEKIQYIP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEECC
GWRSTNGKFIPRDLIKVMNSEKGDCRDFVVSIAAILKSIGYKVYPALIRAGEIFTVPVLH
CEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEE
LPNFHSFDYVILKVIDKDDKIYWIDPCNSLSMANGMFPKIANRMALVLDPERSSYEQVSS
CCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHCCEEEEECCCCCCHHHHHC
IDPKHSQIIHDSTLEIEGNITNWKGAISYIGENSAISLHNKLLYMSQQQIKESFFNDISG
CCCCHHHEEECCEEEEECCCCCCCHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCC
IYLEEHNKKNITLPSVNLKLPRIVKDGTIEYEYNTDCQIKKTNAGPVLFASIGYNSVFNN
EEEEECCCCCEEECCCCCCCCCEEECCEEEEEECCCCEEEECCCCCEEEEECCHHHHHHH
IISVAPKQIGDLFLGTPHTNYNNLVIKNLKLKNIDHLNYIIDTPWIYVERSCKHQGDDTE
HHHHCCHHHCCEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCHH
IISKIVVRQSLIPNNDLKSDVYKKLKDDIEQHFNKTAIVLVE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA