| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182975
Identifier: 189182975
GI number: 189182975
Start: 70751
End: 72649
Strand: Reverse
Name: 189182975
Synonym: OTT_0068
Alternate gene names: NA
Gene position: 72649-70751 (Counterclockwise)
Preceding gene: 189182977
Following gene: 189182974
Centisome position: 3.62
GC content: 29.07
Gene sequence:
>1899_bases ATGTTATATAGGGTATTATTACTACAATTAATGTTTTTAATTGTAACAATCAATTCAATGCATGCAAGATGGAAGTGTTA TAATGACAGTAATTTAGAAATAATGCACTTCGAACAAAATATTATAGTTAATAGTGATGGTTCCAGTGAAGAGATAATAG AGCAGCAAGTTAAAATCCTCAATGAGGCTGGTCGTGAATTTTTTACTAATTATATGCTAGAATATGATAGTGTACATTCT CAAATAGATATAATAATTGCTAAAACAATCTTCGAAGGAAAAGAATATAATGTAGATCTTAAATCAATTAAGAGCATGCC TTTAGCTAGTAGCAGGTATGGTTTTAGTCAACAGCAGCAGATTTTAATAAATTTTGCCAAAGTTGAAATTGGAGCAGAAA TACATTTAACATATACGAGAAAAAATAAGACATTTGCTGAAAATTATTATAGTGACTTATTTGAATTTGGTACTAATAGT TGGCAACAAAAAGCACATATAAAAATTAATTCTGTATTACCTTTATATATTAAAATTAATGATCCACATAATGCCTTGAA AGTAAAAACAAGCTCCAAAGATAAGTTTCATTCAGCTGAAATAACTTTAATTAAGCCATTAACCACTGAGTTAACAAATG AACCTGAAAACTCATTATTAAGCAATCAGCACAAAACTTGGGTATCTATCGCATCCACTAACACCTGGGAAGATGTAGCA AGCAAATTTACTGATGATTATTATAAAATACTAAATCAAAAATTACCTAAGTTATTTAAAACTATTGCTAATAAAGCACA AAAATATACAAAATCTGAAGATCAAATTAATTCTGTTACTTCAGATTTAATTCATGCAGTCCAATATCATGGAGATTATA GATCTATTAGATATGGTAGATTTGTACCATGGAACTTAGAACAAACAGCTAATGCTCAATTAGGTGATTGTAAAGATTTC TCAATTAGTACAGCAGCAATTTTACAAAATATAGGTTACAAAGTACAGCCAGCTTTTGTTAATAGAGGAATACACTCTTT CGAAACTAAATTATGGCTTCCTTCTGTAGAGCATTATAATCATGCAATACTTAGAGCAACAGATAAAGATGGAAAGGTAT ATTGGATTGATCCTACAAATTTTGTAAGCATGGCTGATGGAATTTTTCCTGATATTGCTAATAGAATGGCACTAGTGTTA GACCCAGAAAATTCTATCTATGATCAAATACCAAATATTAATTCAAATCATTCTCAGCTGATAATAGAAGAGTCAATCTC AATGGCTAAAAACAATTCAGCTTACTGGAAAGGTAAATTAATACTTCTAGGAGAGCAAGCGTATTCAATAACTGGAGCAG AATTGAGATTTTCGCAACAGCAAATAAAAGATTTGATTTTTAACTGGGCAAGTGGCTCTTTTTTAGAAGAGCACGATAAG ATCAAAATTATCTTACCAGATCTAACATCAAGAACAGTGAAAGATTTAACTTTTGAGTATGAATATAACAAGCCTAATTC CCTATTTAAATCTAACATTGGTTCAGTATTAGTACCACGGAATTATTTATCTTATATTTCTAATGCAGAGCCAGAGCAGA TTGGTGATCTTTTTTTAGGTTCTCCATGCACTTTTATTCATCGAACTGTAATAAAAGATGTTAAAATAGAAAATATTAAT GTCTTTAATTTTGAAATTGATACTCCATGGGTTTACATTCAAAGGTCCTGTCAATATCAAGGCAATGATACAGAGATTAC AGTTAAAATGATACTTCATAAATCTTTAGTATCAAATAAAGATCTAAAAAGTGATATATACAAAAAATTAAAAGACACTA TTAAACAAAACTTTGAATCAATAGCAATAGTTTTTGATGATTCTAAAATGATGAAATAA
Upstream 100 bases:
>100_bases GATATAGTATAACTCTTAATAGAATTCAAGAAAGTTACTATAACTAGAAAAGTGTTCTTTAGTTTACACAAGTACATTTA TATTTATTTTAGAGTTAAAT
Downstream 100 bases:
>100_bases AGATACAGCATACTCTATTAAATAAAGCAGCTATTAAGGTAACTTATGATATATAAAATCTTCAGAACTTTACTACAATT AGTATTATTAGTAATATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MLYRVLLLQLMFLIVTINSMHARWKCYNDSNLEIMHFEQNIIVNSDGSSEEIIEQQVKILNEAGREFFTNYMLEYDSVHS QIDIIIAKTIFEGKEYNVDLKSIKSMPLASSRYGFSQQQQILINFAKVEIGAEIHLTYTRKNKTFAENYYSDLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALKVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQHKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKYTKSEDQINSVTSDLIHAVQYHGDYRSIRYGRFVPWNLEQTANAQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIHSFETKLWLPSVEHYNHAILRATDKDGKVYWIDPTNFVSMADGIFPDIANRMALVL DPENSIYDQIPNINSNHSQLIIEESISMAKNNSAYWKGKLILLGEQAYSITGAELRFSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSRTVKDLTFEYEYNKPNSLFKSNIGSVLVPRNYLSYISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRSCQYQGNDTEITVKMILHKSLVSNKDLKSDIYKKLKDTIKQNFESIAIVFDDSKMMK
Sequences:
>Translated_632_residues MLYRVLLLQLMFLIVTINSMHARWKCYNDSNLEIMHFEQNIIVNSDGSSEEIIEQQVKILNEAGREFFTNYMLEYDSVHS QIDIIIAKTIFEGKEYNVDLKSIKSMPLASSRYGFSQQQQILINFAKVEIGAEIHLTYTRKNKTFAENYYSDLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALKVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQHKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKYTKSEDQINSVTSDLIHAVQYHGDYRSIRYGRFVPWNLEQTANAQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIHSFETKLWLPSVEHYNHAILRATDKDGKVYWIDPTNFVSMADGIFPDIANRMALVL DPENSIYDQIPNINSNHSQLIIEESISMAKNNSAYWKGKLILLGEQAYSITGAELRFSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSRTVKDLTFEYEYNKPNSLFKSNIGSVLVPRNYLSYISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRSCQYQGNDTEITVKMILHKSLVSNKDLKSDIYKKLKDTIKQNFESIAIVFDDSKMMK >Mature_632_residues MLYRVLLLQLMFLIVTINSMHARWKCYNDSNLEIMHFEQNIIVNSDGSSEEIIEQQVKILNEAGREFFTNYMLEYDSVHS QIDIIIAKTIFEGKEYNVDLKSIKSMPLASSRYGFSQQQQILINFAKVEIGAEIHLTYTRKNKTFAENYYSDLFEFGTNS WQQKAHIKINSVLPLYIKINDPHNALKVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQHKTWVSIASTNTWEDVA SKFTDDYYKILNQKLPKLFKTIANKAQKYTKSEDQINSVTSDLIHAVQYHGDYRSIRYGRFVPWNLEQTANAQLGDCKDF SISTAAILQNIGYKVQPAFVNRGIHSFETKLWLPSVEHYNHAILRATDKDGKVYWIDPTNFVSMADGIFPDIANRMALVL DPENSIYDQIPNINSNHSQLIIEESISMAKNNSAYWKGKLILLGEQAYSITGAELRFSQQQIKDLIFNWASGSFLEEHDK IKIILPDLTSRTVKDLTFEYEYNKPNSLFKSNIGSVLVPRNYLSYISNAEPEQIGDLFLGSPCTFIHRTVIKDVKIENIN VFNFEIDTPWVYIQRSCQYQGNDTEITVKMILHKSLVSNKDLKSDIYKKLKDTIKQNFESIAIVFDDSKMMK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72880; Mature: 72880
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYRVLLLQLMFLIVTINSMHARWKCYNDSNLEIMHFEQNIIVNSDGSSEEIIEQQVKIL CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH NEAGREFFTNYMLEYDSVHSQIDIIIAKTIFEGKEYNVDLKSIKSMPLASSRYGFSQQQQ HHHHHHHHHHHHHHHHHHHCCEEEEEEEEHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHH ILINFAKVEIGAEIHLTYTRKNKTFAENYYSDLFEFGTNSWQQKAHIKINSVLPLYIKIN HHEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC DPHNALKVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQHKTWVSIASTNTWEDVA CCCCEEEEEECCCCCCCCCEEEEEECHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHH SKFTDDYYKILNQKLPKLFKTIANKAQKYTKSEDQINSVTSDLIHAVQYHGDYRSIRYGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC FVPWNLEQTANAQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIHSFETKLWLPSVEHYN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCHHHHHEEECCCHHHCC HAILRATDKDGKVYWIDPTNFVSMADGIFPDIANRMALVLDPENSIYDQIPNINSNHSQL CEEEEEECCCCEEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCHHHHCCCCCCCCCCEE IIEESISMAKNNSAYWKGKLILLGEQAYSITGAELRFSQQQIKDLIFNWASGSFLEEHDK EEEHHHHHHCCCCCEEEEEEEEEECCCCEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCC IKIILPDLTSRTVKDLTFEYEYNKPNSLFKSNIGSVLVPRNYLSYISNAEPEQIGDLFLG EEEEECCCCCCHHHHEEEEEECCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHCC SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRSCQYQGNDTEITVKMILHKSLVSNK CCHHHHHHHHHHHCEECEEEEEEEEECCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCC DLKSDIYKKLKDTIKQNFESIAIVFDDSKMMK CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure MLYRVLLLQLMFLIVTINSMHARWKCYNDSNLEIMHFEQNIIVNSDGSSEEIIEQQVKIL CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECEEEEECCCCHHHHHHHHHHHH NEAGREFFTNYMLEYDSVHSQIDIIIAKTIFEGKEYNVDLKSIKSMPLASSRYGFSQQQQ HHHHHHHHHHHHHHHHHHHCCEEEEEEEEHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHH ILINFAKVEIGAEIHLTYTRKNKTFAENYYSDLFEFGTNSWQQKAHIKINSVLPLYIKIN HHEEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEEECEEEEEEEEC DPHNALKVKTSSKDKFHSAEITLIKPLTTELTNEPENSLLSNQHKTWVSIASTNTWEDVA CCCCEEEEEECCCCCCCCCEEEEEECHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHH SKFTDDYYKILNQKLPKLFKTIANKAQKYTKSEDQINSVTSDLIHAVQYHGDYRSIRYGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC FVPWNLEQTANAQLGDCKDFSISTAAILQNIGYKVQPAFVNRGIHSFETKLWLPSVEHYN CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCCHHHHHEEECCCHHHCC HAILRATDKDGKVYWIDPTNFVSMADGIFPDIANRMALVLDPENSIYDQIPNINSNHSQL CEEEEEECCCCEEEEECCCCHHHHHCCCCHHHHCCEEEEECCCCHHHHCCCCCCCCCCEE IIEESISMAKNNSAYWKGKLILLGEQAYSITGAELRFSQQQIKDLIFNWASGSFLEEHDK EEEHHHHHHCCCCCEEEEEEEEEECCCCEECCHHHCCCHHHHHHHHHCCCCCCCCCCCCC IKIILPDLTSRTVKDLTFEYEYNKPNSLFKSNIGSVLVPRNYLSYISNAEPEQIGDLFLG EEEEECCCCCCHHHHEEEEEECCCCHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHCC SPCTFIHRTVIKDVKIENINVFNFEIDTPWVYIQRSCQYQGNDTEITVKMILHKSLVSNK CCHHHHHHHHHHHCEECEEEEEEEEECCCEEEEEEECCCCCCCCEEEEHHHHHHHHHCCC DLKSDIYKKLKDTIKQNFESIAIVFDDSKMMK CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA