Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182970

Identifier: 189182970

GI number: 189182970

Start: 65375

End: 65653

Strand: Direct

Name: 189182970

Synonym: OTT_0063

Alternate gene names: NA

Gene position: 65375-65653 (Clockwise)

Preceding gene: 189182968

Following gene: 189182976

Centisome position: 3.25

GC content: 31.18

Gene sequence:

>279_bases
ATGAAGGATGTGAGTTCTAAAACTTTGTTATCACAACTAGCTTATGAATTTCGATTAGACAAAAACTTACTTTGCTTCTA
TATAGAATTAGTGCAATTAGAGACACATAAGCTACAGTTGTCAGATCAACTACTGCATGTTGAAGCTAACGATCAGATAT
TAAAAAATATGAGTAATATAGAAGAATCTCATATTATGCTACAAGATGGCAATTTAGAATTACATGGAGCTTGCGGAGAT
ATATCAACTCAAAGTAAATCCGAGTTAGATATAAGTTGA

Upstream 100 bases:

>100_bases
TGAAAACAAAGTTTTACCAGATAAACAGCTAAATGAATCTATTTCTATAAGTCATTTTATTCAAAACAGACATAAAACCC
GTAATGATTTTTATAACCTG

Downstream 100 bases:

>100_bases
TATATAGCCAAGCTACTATAAAACGGTCATAATAATTAGTATGACATATTCTATAGATTTTTCAGAAAAAATACTGGCTA
CAAAGGCAAGATAGAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD
ISTQSKSELDIS

Sequences:

>Translated_92_residues
MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD
ISTQSKSELDIS
>Mature_92_residues
MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD
ISTQSKSELDIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10477; Mature: 10477

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHCC
EESHIMLQDGNLELHGACGDISTQSKSELDIS
CCCEEEEECCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHCC
EESHIMLQDGNLELHGACGDISTQSKSELDIS
CCCEEEEECCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA