| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189182970
Identifier: 189182970
GI number: 189182970
Start: 65375
End: 65653
Strand: Direct
Name: 189182970
Synonym: OTT_0063
Alternate gene names: NA
Gene position: 65375-65653 (Clockwise)
Preceding gene: 189182968
Following gene: 189182976
Centisome position: 3.25
GC content: 31.18
Gene sequence:
>279_bases ATGAAGGATGTGAGTTCTAAAACTTTGTTATCACAACTAGCTTATGAATTTCGATTAGACAAAAACTTACTTTGCTTCTA TATAGAATTAGTGCAATTAGAGACACATAAGCTACAGTTGTCAGATCAACTACTGCATGTTGAAGCTAACGATCAGATAT TAAAAAATATGAGTAATATAGAAGAATCTCATATTATGCTACAAGATGGCAATTTAGAATTACATGGAGCTTGCGGAGAT ATATCAACTCAAAGTAAATCCGAGTTAGATATAAGTTGA
Upstream 100 bases:
>100_bases TGAAAACAAAGTTTTACCAGATAAACAGCTAAATGAATCTATTTCTATAAGTCATTTTATTCAAAACAGACATAAAACCC GTAATGATTTTTATAACCTG
Downstream 100 bases:
>100_bases TATATAGCCAAGCTACTATAAAACGGTCATAATAATTAGTATGACATATTCTATAGATTTTTCAGAAAAAATACTGGCTA CAAAGGCAAGATAGAAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD ISTQSKSELDIS
Sequences:
>Translated_92_residues MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD ISTQSKSELDIS >Mature_92_residues MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNIEESHIMLQDGNLELHGACGD ISTQSKSELDIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10477; Mature: 10477
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNI CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHCC EESHIMLQDGNLELHGACGDISTQSKSELDIS CCCEEEEECCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKDVSSKTLLSQLAYEFRLDKNLLCFYIELVQLETHKLQLSDQLLHVEANDQILKNMSNI CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEECCEEEEEECCHHHHHHHHCC EESHIMLQDGNLELHGACGDISTQSKSELDIS CCCEEEEECCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA