Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182952

Identifier: 189182952

GI number: 189182952

Start: 52308

End: 52847

Strand: Reverse

Name: 189182952

Synonym: OTT_0045

Alternate gene names: NA

Gene position: 52847-52308 (Counterclockwise)

Preceding gene: 189182953

Following gene: 189182951

Centisome position: 2.63

GC content: 27.78

Gene sequence:

>540_bases
ATGGTTATGCGAATCAGTGATACTAGTGATTCTATTCAAATCTTGCCTAACAGCAATAGTTTAGCTGAATTAACAAATTT
AGTTTACAGTTATATATTTAACTATGAATGGTATAATAATTTATTATTGCTTGGATGGGATAACAGTACATATCGGAACA
TTCATGATAAAGTTATTCAGCTTTGCACTACTGATATAGATCATATAAGTCAAGATGATAGTCTAATATGCTTAGAATAC
TTTTGTAGAGACCAAAGCAAACGAAATGTATATACACTAATAAATTTTGATTGTAATATACTAAGATCAATAGTAGATAA
GCATTATATATTATCATCTATATGCCAAAGTAATAAAACTAACTTAACTATTGTATATAATAATCAGAATAAAGGGTTAC
AGGAACAATTAGATAGCTTAACTCAACAATGTTGCAACAATAGCTGCTATTCTGATAGTAGAATTAATTTTTTAGATATT
GATCAGTTTAGAGATTTTGTAGGTGATATATTAGGCCTCTTTCGAAACTGGTTAAGGTAG

Upstream 100 bases:

>100_bases
ATATCTTAGTTTTTTAATACCTATACAACAAATACAGCTTGATAATTCAGCTAATGTAATTTATAAATCAGGAATGTAAT
ATAATTTTTAAATATATAGG

Downstream 100 bases:

>100_bases
TTCAAAATTATTGCCGATAAATATCGAAATATACGTAAAAGATTCGGTCTTAGATTTAATTTGATCTCTGGTATTTATAA
TTTTGAACTACCTTAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MVMRISDTSDSIQILPNSNSLAELTNLVYSYIFNYEWYNNLLLLGWDNSTYRNIHDKVIQLCTTDIDHISQDDSLICLEY
FCRDQSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQNKGLQEQLDSLTQQCCNNSCYSDSRINFLDI
DQFRDFVGDILGLFRNWLR

Sequences:

>Translated_179_residues
MVMRISDTSDSIQILPNSNSLAELTNLVYSYIFNYEWYNNLLLLGWDNSTYRNIHDKVIQLCTTDIDHISQDDSLICLEY
FCRDQSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQNKGLQEQLDSLTQQCCNNSCYSDSRINFLDI
DQFRDFVGDILGLFRNWLR
>Mature_179_residues
MVMRISDTSDSIQILPNSNSLAELTNLVYSYIFNYEWYNNLLLLGWDNSTYRNIHDKVIQLCTTDIDHISQDDSLICLEY
FCRDQSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKTNLTIVYNNQNKGLQEQLDSLTQQCCNNSCYSDSRINFLDI
DQFRDFVGDILGLFRNWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21043; Mature: 21043

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRISDTSDSIQILPNSNSLAELTNLVYSYIFNYEWYNNLLLLGWDNSTYRNIHDKVIQ
CEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCHHHHCCEEEEECCCCHHHHHHHHHHH
LCTTDIDHISQDDSLICLEYFCRDQSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKT
HHHHHHHHCCCCCCEEHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
NLTIVYNNQNKGLQEQLDSLTQQCCNNSCYSDSRINFLDIDQFRDFVGDILGLFRNWLR
EEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVMRISDTSDSIQILPNSNSLAELTNLVYSYIFNYEWYNNLLLLGWDNSTYRNIHDKVIQ
CEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCHHHHCCEEEEECCCCHHHHHHHHHHH
LCTTDIDHISQDDSLICLEYFCRDQSKRNVYTLINFDCNILRSIVDKHYILSSICQSNKT
HHHHHHHHCCCCCCEEHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
NLTIVYNNQNKGLQEQLDSLTQQCCNNSCYSDSRINFLDIDQFRDFVGDILGLFRNWLR
EEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA