Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189182950

Identifier: 189182950

GI number: 189182950

Start: 50401

End: 50523

Strand: Direct

Name: 189182950

Synonym: OTT_0043

Alternate gene names: NA

Gene position: 50401-50523 (Clockwise)

Preceding gene: 189182949

Following gene: 189182954

Centisome position: 2.51

GC content: 31.71

Gene sequence:

>123_bases
ATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGATACTTGGAGCAATTCTGATTAACAA
TCGTGCGCTATATAACATTAAAATTGCCTATTCTTTTAAATAA

Upstream 100 bases:

>100_bases
GAAACAACTGTATGCAAGGTCTTGAATATGCTTTTAAAGCTCAGGGATTTTCTTTTGAGTTAGTTAAGTTTAGTAATTTT
AATAAAATTTAAAGAGTGAT

Downstream 100 bases:

>100_bases
GTCTCATGGTAATTTATGGAAATTTTATAGGCTAAACAGAGATAGTACATCCGCTTAAACATTTTCTAATAAGCGATATA
AGCTTCATATTTGCTCTAGA

Product: replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MEKDLAKIAPSNIQAEQMILGAILINNRALYNIKIAYSFK

Sequences:

>Translated_40_residues
MEKDLAKIAPSNIQAEQMILGAILINNRALYNIKIAYSFK
>Mature_40_residues
MEKDLAKIAPSNIQAEQMILGAILINNRALYNIKIAYSFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4508; Mature: 4508

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDLAKIAPSNIQAEQMILGAILINNRALYNIKIAYSFK
CCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEEEEEEC
>Mature Secondary Structure
MEKDLAKIAPSNIQAEQMILGAILINNRALYNIKIAYSFK
CCCCCCCCCCCCCCHHHEEEEEEEECCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA