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The map label for this gene is rmuC [H]

Identifier: 189182935

GI number: 189182935

Start: 34297

End: 35646

Strand: Direct

Name: rmuC [H]

Synonym: OTT_0028

Alternate gene names: 189182935

Gene position: 34297-35646 (Clockwise)

Preceding gene: 189182934

Following gene: 189182936

Centisome position: 1.71

GC content: 27.48

Gene sequence:

>1350_bases
GTGATTGGAATTGTGAGTTTTATTATTTATAGTGGAGTAGTTATTGCATTTATTATATTGGTAAGTGTAATTTGGATTTT
AATTTATAAGAGCACTAGACTGAAATTAAAACTTATTTTCATTGAAGAAAATTATACTAAACTCTTAGAACAATTGAAGC
AGCTGGAACATGATAGATTAAATTACGTACAAGAAATACAAGAATTAAAGACTAGAATTGAGTTTATTAAGTTAGATAAT
AGCAAAAAAGAAAAAATGAATGAAGAAGCTTTACAACTTGCTAAAGCTTCTTTGCTAGATTTAGGAAACGATTTATCTAA
GCAATTAATTGCTTTACATAAGCAAGAAACAGAGCAGTCAAGAAAATTATCTGAAAATAATATTCATAATACTAACTTAA
AATTTCAGCAAGAATTTCAAAAATTGTTAGAAATTATTGCAGTACTTAATAATAGAGTTGATGAGTCAACTAAGATTGTA
GAAGTTATTAAGAGTTCACTATTATCTCCATCTGGGGTAGGGATGTTAGCTGAAATCACTTTAGAGAATATTTTAAAGGC
ATCAGGTTTAAGGGTTAAATATGATTTTATTATGCAATGTAATTTAACTGATGAGAATAATATGCGGTTGCGTCCTGATG
CATTAATTTTTTTACCTGGTGATAATTTGATGATTATTGATGCTAAGGCTTCTAAATTTCTAATAGATATGTGTAATAAC
AACAATAATGCTGCTATTCATACAGCTAAAGTTGAAAAATTAAGAAAGAGCATAAACCTTCATCTTAAAAATCTATCATC
TAAAGAATATGCTCAGGCTATAGTTGATTCTTGTCAATTTGAGGCTCGTAATTTTAATAATATTATTACGTTAATGTTTT
TGCCTACTGAGACTGCGATAGAAAATTTATCAACTATTGATAGAGAATTTATTCATAAATCATGGGAGCTTAATATTTTC
CCTGTCGGGCCTTCTGGTTTGATGAATATGTTATCTTTTGCTAAATTTCAAATTAAAGAACAAATGCGATATGAAAATCA
AAAATTAATATTAAATGAAGTAGAAAAAGTAATATTATCTATTAATCTATTGACAGAATATGCTCACAAACTGAGTAGTA
ATGTTCAAGGCATAGTAAGCAGCTATGATCAATTTGCAGCATCTTTTAATAGGAATTTTTTATCAAAAGCTAAAACAATT
CAACAACTTGGAATCGAAACTAAAAAAAGTAGGAATATTAGTAATAATAGGTTGATGTTGCCAAGATATCAATTAGTTTC
ATCTAAATCAGATATTGATATAGTCAACGTTAAGATTAGTGATACAAAGGAGTTAGAAGCTGATAAGTAA

Upstream 100 bases:

>100_bases
TCCTGAGCAATATGTTCAGTTAAGTAGGATATTATTATAAGAGAGTATTATTAGTGTAAAGGCACTAAATATAACAACAA
CAGAATAGCTAACTAAGTAA

Downstream 100 bases:

>100_bases
GATTAATTTAGAAATATATTGTAGTTGAATAATATGTTATATTAACCTATACTATGTCATTGTTTAATTTCTGTTAAATT
TACCATATAACTTGCATGTG

Product: DNA recombination protein RmuC homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MIGIVSFIIYSGVVIAFIILVSVIWILIYKSTRLKLKLIFIEENYTKLLEQLKQLEHDRLNYVQEIQELKTRIEFIKLDN
SKKEKMNEEALQLAKASLLDLGNDLSKQLIALHKQETEQSRKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDESTKIV
EVIKSSLLSPSGVGMLAEITLENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKFLIDMCNN
NNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMFLPTETAIENLSTIDREFIHKSWELNIF
PVGPSGLMNMLSFAKFQIKEQMRYENQKLILNEVEKVILSINLLTEYAHKLSSNVQGIVSSYDQFAASFNRNFLSKAKTI
QQLGIETKKSRNISNNRLMLPRYQLVSSKSDIDIVNVKISDTKELEADK

Sequences:

>Translated_449_residues
MIGIVSFIIYSGVVIAFIILVSVIWILIYKSTRLKLKLIFIEENYTKLLEQLKQLEHDRLNYVQEIQELKTRIEFIKLDN
SKKEKMNEEALQLAKASLLDLGNDLSKQLIALHKQETEQSRKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDESTKIV
EVIKSSLLSPSGVGMLAEITLENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKFLIDMCNN
NNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMFLPTETAIENLSTIDREFIHKSWELNIF
PVGPSGLMNMLSFAKFQIKEQMRYENQKLILNEVEKVILSINLLTEYAHKLSSNVQGIVSSYDQFAASFNRNFLSKAKTI
QQLGIETKKSRNISNNRLMLPRYQLVSSKSDIDIVNVKISDTKELEADK
>Mature_449_residues
MIGIVSFIIYSGVVIAFIILVSVIWILIYKSTRLKLKLIFIEENYTKLLEQLKQLEHDRLNYVQEIQELKTRIEFIKLDN
SKKEKMNEEALQLAKASLLDLGNDLSKQLIALHKQETEQSRKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDESTKIV
EVIKSSLLSPSGVGMLAEITLENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKFLIDMCNN
NNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMFLPTETAIENLSTIDREFIHKSWELNIF
PVGPSGLMNMLSFAKFQIKEQMRYENQKLILNEVEKVILSINLLTEYAHKLSSNVQGIVSSYDQFAASFNRNFLSKAKTI
QQLGIETKKSRNISNNRLMLPRYQLVSSKSDIDIVNVKISDTKELEADK

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=245, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 51520; Mature: 51520

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGIVSFIIYSGVVIAFIILVSVIWILIYKSTRLKLKLIFIEENYTKLLEQLKQLEHDRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHH
NYVQEIQELKTRIEFIKLDNSKKEKMNEEALQLAKASLLDLGNDLSKQLIALHKQETEQS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDESTKIVEVIKSSLLSPSGVGMLAEIT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKFLIDMCNN
HHHHHHHCCCEEEEEEEEEEECCCCCCCEECCCEEEEECCCCEEEEECCCCEEEHEEECC
NNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMFLPTETAI
CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH
ENLSTIDREFIHKSWELNIFPVGPSGLMNMLSFAKFQIKEQMRYENQKLILNEVEKVILS
HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INLLTEYAHKLSSNVQGIVSSYDQFAASFNRNFLSKAKTIQQLGIETKKSRNISNNRLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEC
PRYQLVSSKSDIDIVNVKISDTKELEADK
CHHHHHCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MIGIVSFIIYSGVVIAFIILVSVIWILIYKSTRLKLKLIFIEENYTKLLEQLKQLEHDRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHHH
NYVQEIQELKTRIEFIKLDNSKKEKMNEEALQLAKASLLDLGNDLSKQLIALHKQETEQS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDESTKIVEVIKSSLLSPSGVGMLAEIT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH
LENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKFLIDMCNN
HHHHHHHCCCEEEEEEEEEEECCCCCCCEECCCEEEEECCCCEEEEECCCCEEEHEEECC
NNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMFLPTETAI
CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHH
ENLSTIDREFIHKSWELNIFPVGPSGLMNMLSFAKFQIKEQMRYENQKLILNEVEKVILS
HHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
INLLTEYAHKLSSNVQGIVSSYDQFAASFNRNFLSKAKTIQQLGIETKKSRNISNNRLML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEC
PRYQLVSSKSDIDIVNVKISDTKELEADK
CHHHHHCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA