| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is suhB
Identifier: 189182916
GI number: 189182916
Start: 13897
End: 14682
Strand: Direct
Name: suhB
Synonym: OTT_0009
Alternate gene names: NA
Gene position: 13897-14682 (Clockwise)
Preceding gene: 189182915
Following gene: 189182917
Centisome position: 0.69
GC content: 26.72
Gene sequence:
>786_bases ATGACATTACCTATTATTAATATACTTGAACAAATTATTAGAAAGGCAACAGTTTTTTTATTAAGAGATTTTAGCGAATT GGATGTAATACAAAACACTAAGTGTGACACAAGGTCATTTGTTATTCATTCTTGCATTCAAATTCAAAAACGCATAATTG AAGGAGTAAGTAAGTATTCGCAAAATGATATTGGAAAATTAATTTTCTACCACGAACAACAAATACAAAATTTACCAGAT GGTAAGTACTTATTAGTAAATTTAATAGATAACTTAATTAATTTAGAAAAAGCATTACCATTTTTTTGTATTGAATTTTC TCTGCATGAAATAGTACATCAAAAAAGAAATATTCAATGTGGAATACAATATTTCCCAGCTATAGGAGAAATTTACTACA TGGATAATAATGAAGTATGGGTTGATAAATTTAACCATCAGCAATCAAATCGTTTTAAGATACGAGTTCCAAGTTCAAAA ACTAATAAATCTAAGTTATTGGCAATGGAATTTATGTTAGCTGATTCATGGCATAAGGCCATTCCAATGAAGATTAACGA TACTATTATTAAAAGTGAACAAATTAGGTGTTTTGGTAGTTTGAGATATGCATGTACATTATTTTTAACAGGTAAACTTG ATGTTATTATATATGATCACTTAGCAAAAAATTATGATTCAGATGATTTAATCAAATTAATTGTAACTAGAGCTGGAGGC GTAATTAACAACATTAGTTCTAATATTAATGTAATTTGTGCACCATCAATAAGAATAAGTGTATAA
Upstream 100 bases:
>100_bases TTTTATCAAATGGAGCTAAAATCATGGTTCCTCCTTATCTAAGCGCTGGAGAAAAAATCGTTGTTAAGCTAGAAGATATT TCATTTGTTGAGCGTGCTAA
Downstream 100 bases:
>100_bases TTATAATGAGTTTGATAAAATGAAAATTCTTGGCATTTGCACTTCCAATAATAGTTGTTCGGTAGCAATTAGCAATCATA GCAATGTTTTAGCTGCTAAT
Product: extragenic suppressor protein SuhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTLPIINILEQIIRKATVFLLRDFSELDVIQNTKCDTRSFVIHSCIQIQKRIIEGVSKYSQNDIGKLIFYHEQQIQNLPD GKYLLVNLIDNLINLEKALPFFCIEFSLHEIVHQKRNIQCGIQYFPAIGEIYYMDNNEVWVDKFNHQQSNRFKIRVPSSK TNKSKLLAMEFMLADSWHKAIPMKINDTIIKSEQIRCFGSLRYACTLFLTGKLDVIIYDHLAKNYDSDDLIKLIVTRAGG VINNISSNINVICAPSIRISV
Sequences:
>Translated_261_residues MTLPIINILEQIIRKATVFLLRDFSELDVIQNTKCDTRSFVIHSCIQIQKRIIEGVSKYSQNDIGKLIFYHEQQIQNLPD GKYLLVNLIDNLINLEKALPFFCIEFSLHEIVHQKRNIQCGIQYFPAIGEIYYMDNNEVWVDKFNHQQSNRFKIRVPSSK TNKSKLLAMEFMLADSWHKAIPMKINDTIIKSEQIRCFGSLRYACTLFLTGKLDVIIYDHLAKNYDSDDLIKLIVTRAGG VINNISSNINVICAPSIRISV >Mature_260_residues TLPIINILEQIIRKATVFLLRDFSELDVIQNTKCDTRSFVIHSCIQIQKRIIEGVSKYSQNDIGKLIFYHEQQIQNLPDG KYLLVNLIDNLINLEKALPFFCIEFSLHEIVHQKRNIQCGIQYFPAIGEIYYMDNNEVWVDKFNHQQSNRFKIRVPSSKT NKSKLLAMEFMLADSWHKAIPMKINDTIIKSEQIRCFGSLRYACTLFLTGKLDVIIYDHLAKNYDSDDLIKLIVTRAGGV INNISSNINVICAPSIRISV
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30158; Mature: 30026
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPIINILEQIIRKATVFLLRDFSELDVIQNTKCDTRSFVIHSCIQIQKRIIEGVSKYS CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC QNDIGKLIFYHEQQIQNLPDGKYLLVNLIDNLINLEKALPFFCIEFSLHEIVHQKRNIQC CCCHHHEEEEEHHHHCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE GIQYFPAIGEIYYMDNNEVWVDKFNHQQSNRFKIRVPSSKTNKSKLLAMEFMLADSWHKA CEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHC IPMKINDTIIKSEQIRCFGSLRYACTLFLTGKLDVIIYDHLAKNYDSDDLIKLIVTRAGG CCCEECCEEECCCHHHHHHHHEEEEEEEEECCEEEEEEEHHHCCCCCHHHHHHHHHHCCC VINNISSNINVICAPSIRISV HHHCCCCCCEEEEECCEEEEC >Mature Secondary Structure TLPIINILEQIIRKATVFLLRDFSELDVIQNTKCDTRSFVIHSCIQIQKRIIEGVSKYS CCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC QNDIGKLIFYHEQQIQNLPDGKYLLVNLIDNLINLEKALPFFCIEFSLHEIVHQKRNIQC CCCHHHEEEEEHHHHCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEE GIQYFPAIGEIYYMDNNEVWVDKFNHQQSNRFKIRVPSSKTNKSKLLAMEFMLADSWHKA CEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHC IPMKINDTIIKSEQIRCFGSLRYACTLFLTGKLDVIIYDHLAKNYDSDDLIKLIVTRAGG CCCEECCEEECCCHHHHHHHHEEEEEEEEECCEEEEEEEHHHCCCCCHHHHHHHHHHCCC VINNISSNINVICAPSIRISV HHHCCCCCCEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA