| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is yeaZ [C]
Identifier: 189182917
GI number: 189182917
Start: 14675
End: 15403
Strand: Direct
Name: yeaZ [C]
Synonym: OTT_0010
Alternate gene names: 189182917
Gene position: 14675-15403 (Clockwise)
Preceding gene: 189182916
Following gene: 189182918
Centisome position: 0.73
GC content: 31.82
Gene sequence:
>729_bases GTGTATAATTATAATGAGTTTGATAAAATGAAAATTCTTGGCATTTGCACTTCCAATAATAGTTGTTCGGTAGCAATTAG CAATCATAGCAATGTTTTAGCTGCTAATTGCAATGTTGAACCTGCTATGCAAGCTCAATATCTTGTTTGTATGATAAAAA AAACAATGATGCAGGCGAAAGTAACATTTGAAGACATTGATTACTTAGCTGTTACTCAAGGGCCAGGCAGCTTTACTGGA ATAAGAGTAGGACTTGCTGCAGCGTTAGGTATTATTACGGTATCCAAGATCGTTCCTATAGTTATATCTGATTTTGAGGT ATTAAAATTTCTTATTAAGCAACAAATTAAAGGAGTAAATATAGCCTTCACTATTATTAATGCATATAGAAATAAGGTAT ATCTACAAAAATTTGATTTTAATAGCAGCTCATCATTTCAGGCAGTATTAATTGATGCTACGGAAGCAGTAAACTTGATA TTAAATACCAAATCTCTATCTGGTTGCGCAGGAAACGCAACTAAGATGATATATGAGTTATTAGTTACAACTACTACAAC TATTCCAAATAACATCTTCTTCTTACCACGATTTGCATATTATGATGCAAGACCAGTATGCAGATTGGCATATCAATTAT TAGCATCAAAACAAAGTTATTCAACTGAACTTTGTCCATTATACATATGTAATAGAGATTTTAAGCATTGGAAACTAGAG TATAGGTAA
Upstream 100 bases:
>100_bases TCAGATGATTTAATCAAATTAATTGTAACTAGAGCTGGAGGCGTAATTAACAACATTAGTTCTAATATTAATGTAATTTG TGCACCATCAATAAGAATAA
Downstream 100 bases:
>100_bases GCTCTCTCGCACTCACCTATACTCTCTTAAGGCTTATTTTTTAATGAAGTTTCTAACCTTGAATTAACGTTTTTTGACTA TAATTATTTGATGTTGGTTC
Product: putative glycoprotein endopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MYNYNEFDKMKILGICTSNNSCSVAISNHSNVLAANCNVEPAMQAQYLVCMIKKTMMQAKVTFEDIDYLAVTQGPGSFTG IRVGLAAALGIITVSKIVPIVISDFEVLKFLIKQQIKGVNIAFTIINAYRNKVYLQKFDFNSSSSFQAVLIDATEAVNLI LNTKSLSGCAGNATKMIYELLVTTTTTIPNNIFFLPRFAYYDARPVCRLAYQLLASKQSYSTELCPLYICNRDFKHWKLE YR
Sequences:
>Translated_242_residues MYNYNEFDKMKILGICTSNNSCSVAISNHSNVLAANCNVEPAMQAQYLVCMIKKTMMQAKVTFEDIDYLAVTQGPGSFTG IRVGLAAALGIITVSKIVPIVISDFEVLKFLIKQQIKGVNIAFTIINAYRNKVYLQKFDFNSSSSFQAVLIDATEAVNLI LNTKSLSGCAGNATKMIYELLVTTTTTIPNNIFFLPRFAYYDARPVCRLAYQLLASKQSYSTELCPLYICNRDFKHWKLE YR >Mature_242_residues MYNYNEFDKMKILGICTSNNSCSVAISNHSNVLAANCNVEPAMQAQYLVCMIKKTMMQAKVTFEDIDYLAVTQGPGSFTG IRVGLAAALGIITVSKIVPIVISDFEVLKFLIKQQIKGVNIAFTIINAYRNKVYLQKFDFNSSSSFQAVLIDATEAVNLI LNTKSLSGCAGNATKMIYELLVTTTTTIPNNIFFLPRFAYYDARPVCRLAYQLLASKQSYSTELCPLYICNRDFKHWKLE YR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 27138; Mature: 27138
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNYNEFDKMKILGICTSNNSCSVAISNHSNVLAANCNVEPAMQAQYLVCMIKKTMMQAK CCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC VTFEDIDYLAVTQGPGSFTGIRVGLAAALGIITVSKIVPIVISDFEVLKFLIKQQIKGVN CEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE IAFTIINAYRNKVYLQKFDFNSSSSFQAVLIDATEAVNLILNTKSLSGCAGNATKMIYEL EEEEEEEHHHCEEEEEEECCCCCCCEEEEEEECHHEEEEEEECCCCCCCCCHHHHHHHHH LVTTTTTIPNNIFFLPRFAYYDARPVCRLAYQLLASKQSYSTELCPLYICNRDFKHWKLE HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEE YR CC >Mature Secondary Structure MYNYNEFDKMKILGICTSNNSCSVAISNHSNVLAANCNVEPAMQAQYLVCMIKKTMMQAK CCCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC VTFEDIDYLAVTQGPGSFTGIRVGLAAALGIITVSKIVPIVISDFEVLKFLIKQQIKGVN CEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE IAFTIINAYRNKVYLQKFDFNSSSSFQAVLIDATEAVNLILNTKSLSGCAGNATKMIYEL EEEEEEEHHHCEEEEEEECCCCCCCEEEEEEECHHEEEEEEECCCCCCCCCHHHHHHHHH LVTTTTTIPNNIFFLPRFAYYDARPVCRLAYQLLASKQSYSTELCPLYICNRDFKHWKLE HHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEE YR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]