Click here to switch to the map view.

The map label for this gene is yhgN [C]

Identifier: 189026211

GI number: 189026211

Start: 1073178

End: 1074014

Strand: Direct

Name: yhgN [C]

Synonym: TPASS_0988

Alternate gene names: 189026211

Gene position: 1073178-1074014 (Clockwise)

Preceding gene: 189026209

Following gene: 189026213

Centisome position: 94.18

GC content: 51.97

Gene sequence:

>837_bases
ATGCTCTGCATGCTCGAAATGGACAGTGCAAGGCAGCGCTTCGTACGAGATGTGGAACATATCCGCCACGAAGATATGCA
CGAAATGGGTATCTGCGCGCGGCGCGGTTTTACATGCAGCGACACACACCCCCACCGTAAGCGCCACAGCCAGAAAAAAT
GCTGCACGCGCGCTGTACCCACACAAGGTAACGGAGATTGCCGCACGCGAGGTTCTTCTCGTATACTCACCCCTCGTATG
AGTACTTGGACACACATCTGGTCTACTGCGTTTACCTTGCTGTTTATTATCGATCCGATTGGGAACATACCGGTGGTACT
GTCTGTGCTGCGCACCGTGCCAGCTGAGCGTCATACCCGGATCATTTTTAGAGAACTGCTTCTAGGACTGGTGCTCATGC
TCTCCTTCCTTTTTTGCGGAAAAGTTTTCCTATCTTTGTTCCAGCTAGAAACGGGAGTAATGAAAATGGCCGGAAGCGTC
ATTCTCTTTCTCGTTGGCATCAAGATGGTATTTCCTGATCAACACGCGCTCCCCTCCACCACAGAAGAGGAACCGTTTAT
TGTTCCCATCGCCACTCCCATGATCGCAGGTCCTTCGGCGTTCACCACGCTGGTAATTATGGGAGAGACGAAGGGGACAT
CCCGTCTCGCCACCTGTGCTGCGCTGCTTGTTGCGTGGACGCTCGCGTGTCTTATTATGATAAGCGCACCGTGTCTATAC
CGTCTTCTTAAAGAAAAGGGAATTACCGCGCTTGAGCGAATCACAGGTATCTTGCTGCTCATTCTTTCCATCCAGATGTG
TGTTGAGGGAGCCCGGGGCATTATTGCCACTTCCTAG

Upstream 100 bases:

>100_bases
AGGGGCGCTGGTACTGAGTAAAATCGTAGCTCACACCTATAACACGACGACCACCAAGCGGTACCGTAATGCGTCCGTTA
ATGTCGGTACGGTACGTTTC

Downstream 100 bases:

>100_bases
CAAGAAGGAAAACTACCCGCTGCGTACGTGCGGGCTTAGGGGACGACGACAACGTTCGCGACTCTGCCATCTGCCAGGTA
TGCGCGGGCGTTGCTCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MLCMLEMDSARQRFVRDVEHIRHEDMHEMGICARRGFTCSDTHPHRKRHSQKKCCTRAVPTQGNGDCRTRGSSRILTPRM
STWTHIWSTAFTLLFIIDPIGNIPVVLSVLRTVPAERHTRIIFRELLLGLVLMLSFLFCGKVFLSLFQLETGVMKMAGSV
ILFLVGIKMVFPDQHALPSTTEEEPFIVPIATPMIAGPSAFTTLVIMGETKGTSRLATCAALLVAWTLACLIMISAPCLY
RLLKEKGITALERITGILLLILSIQMCVEGARGIIATS

Sequences:

>Translated_278_residues
MLCMLEMDSARQRFVRDVEHIRHEDMHEMGICARRGFTCSDTHPHRKRHSQKKCCTRAVPTQGNGDCRTRGSSRILTPRM
STWTHIWSTAFTLLFIIDPIGNIPVVLSVLRTVPAERHTRIIFRELLLGLVLMLSFLFCGKVFLSLFQLETGVMKMAGSV
ILFLVGIKMVFPDQHALPSTTEEEPFIVPIATPMIAGPSAFTTLVIMGETKGTSRLATCAALLVAWTLACLIMISAPCLY
RLLKEKGITALERITGILLLILSIQMCVEGARGIIATS
>Mature_278_residues
MLCMLEMDSARQRFVRDVEHIRHEDMHEMGICARRGFTCSDTHPHRKRHSQKKCCTRAVPTQGNGDCRTRGSSRILTPRM
STWTHIWSTAFTLLFIIDPIGNIPVVLSVLRTVPAERHTRIIFRELLLGLVLMLSFLFCGKVFLSLFQLETGVMKMAGSV
ILFLVGIKMVFPDQHALPSTTEEEPFIVPIATPMIAGPSAFTTLVIMGETKGTSRLATCAALLVAWTLACLIMISAPCLY
RLLKEKGITALERITGILLLILSIQMCVEGARGIIATS

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=39.3782383419689, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=28.3505154639175, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787809, Length=183, Percent_Identity=26.2295081967213, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 30912; Mature: 30912

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCMLEMDSARQRFVRDVEHIRHEDMHEMGICARRGFTCSDTHPHRKRHSQKKCCTRAVP
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
TQGNGDCRTRGSSRILTPRMSTWTHIWSTAFTLLFIIDPIGNIPVVLSVLRTVPAERHTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
IIFRELLLGLVLMLSFLFCGKVFLSLFQLETGVMKMAGSVILFLVGIKMVFPDQHALPST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TEEEPFIVPIATPMIAGPSAFTTLVIMGETKGTSRLATCAALLVAWTLACLIMISAPCLY
CCCCCEEEEECCCHHCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLKEKGITALERITGILLLILSIQMCVEGARGIIATS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLCMLEMDSARQRFVRDVEHIRHEDMHEMGICARRGFTCSDTHPHRKRHSQKKCCTRAVP
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
TQGNGDCRTRGSSRILTPRMSTWTHIWSTAFTLLFIIDPIGNIPVVLSVLRTVPAERHTR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHH
IIFRELLLGLVLMLSFLFCGKVFLSLFQLETGVMKMAGSVILFLVGIKMVFPDQHALPST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TEEEPFIVPIATPMIAGPSAFTTLVIMGETKGTSRLATCAALLVAWTLACLIMISAPCLY
CCCCCEEEEECCCHHCCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLKEKGITALERITGILLLILSIQMCVEGARGIIATS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]