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The map label for this gene is dctM [H]

Identifier: 189026181

GI number: 189026181

Start: 1040579

End: 1042477

Strand: Direct

Name: dctM [H]

Synonym: TPASS_0958

Alternate gene names: 189026181

Gene position: 1040579-1042477 (Clockwise)

Preceding gene: 189026180

Following gene: 189026196

Centisome position: 91.32

GC content: 52.66

Gene sequence:

>1899_bases
ATGAAGGGTACACGGGGACAACTGGTTTTGCGCAGCATAGCGCTTCTGCTCATTGGGACGCTCATGCTGCTGCCGTTAGT
GCTTTTTTTAATTGAACGGATATTCGGTTTTCTTACGCGGGGCGTAGGTTCCGAGGTGTTCTCCGCGCACGAGGACTTCA
TTTTCCTTTTTTTCTCCTCCTCTGACGCCGCGGTTGCACAGTTAGCCTTCGTGTTTTCCTGTGTTGCAGGCATTTACGCT
GCGCGTGAACGTAAACACTTGAGTGTCACCCTGTTCTCGTGCGACGTGGACAGACCGATGCACCGCGTTCTTTCCTTCCT
CTCTGCGATCTGTACGGTGGCAGTGCTCAGCGCTTGCTTTTTTGCGTCTGGACCGAATATCGTCGCAGTTTTTCGCAAAG
AAGAAGCTGTGTGGGGAGTGCCGTTACGCTGGATTTTTACCGCGCTGCCATGCATGTACGGCGCGCTTCTTTTTCACTAC
GCACGAGAAGTCAAGTGTCGTACGTGCGTCATCGTTGGACTTTTAGTTGGCGTGCTGATAAGCACAGGATCCATCGCCTC
TGTGCTTTTCCATCTCTTTGACCTGACCGTACCCCTGCTGGATAGTGTCTTTCACGGCTGGGTAGCAGTGGGTACACGAC
TCTTTTGGCCGTTCGTGCTTCTCCTTCTTCTGCTCGCTGCACAGGGTCTCCCGCTTTTTATTACGCTGCTTGCCATCGCG
TATCTGGCGCTGAGCGTCGATGGAGGATACGTGGATACCCTTCCTCTCGAGGGGTACAAGATCCTCACGGATACGGGAGG
AATCGTAGCGGTTCCGCTTTTTGCCACTGCAAGTCTGCTGCTTGCACGCGGCAGTACTGGAACGCGTCTGCTTCGCTTGG
TAAAAGAAGCGGTGGGCTGGCTTCGTGGAGGAGCAGCAGTTGCCTGCGTGGCAGTAGCGGCGCTGTTTACGTCATTAACC
GGTGTATCGGGGGTGACAATCTTGGCCCTAGGAAGCTTATTCAAGCTGATTCTCACGGGTAACAAATACCCCGAGCACGA
TGCAGAAGCGCTCATTACCTCCTCTGGCGCCATCGGACTCCTATTTCCACCCAGTGCAGCGATTATCATTTTTGGCGCAA
CTAACATTCTTACCGTACATATTGTGGATTTGTTCAAAGGTGCATTGCTTCCCGGGACATTACTTGTGCTTTCTGCCATG
TGCTTAGGGGTGGCAAAAGATCGCACACAGGTCCGTCCATCCTTCTCCTGGCAGTTGCTTGTCCATGCCGTAAGAGGAAG
CGTATTTGACCTTGCCCTGCCAGTGTGTATTAGCCTGGGCTATTTTTCCGGTACGCTCAACCTGCTGCAGTGCGCGTCGC
TGACAACTCTCCTGGCTTTTGTATTAGGTACGTGGGTGCGCAGGGATTTCACCGTGAAGGAAGCTTGCGCAACCGCCCTT
GAGAGTCTGCCTATCGTCGGTGGCATTTTAATCATTGTCGCAGCAGCGAAGGGGCTGTCCTTCTACCTGGTGGATGCAAA
CGTACCGGACACCCTCATCGCGTTTCTGCAGCATGCAATTTCATCAAAGTATGCGTTTTTGCTCCTTTTGAATGTACTGT
TGCTGGGTGTCGGGTGTATCATGGATCTGTATTCGGCGATCCTGGTAATTTCTCCCCTAGTGTTACCCCTTGCAGTGCAT
TTTGGGGTACATCCGGTGCACGCGAGCGTCGTTTTCCTGATGAACCTTGAGCTAGGTGCGCTGACCCCGCCGATTGGAAT
GAACTTGTTCATCGCGAGTTTTGCATTCGAAAAACCGATTGTGCATCTCACGCGCGCTATTGCACCCTTCTTGCTAGCAC
AACTGGGAGTGCTTCTTCTTACAACTTACATACCATGGCTCAGCACTGCATTCCTGTAG

Upstream 100 bases:

>100_bases
TTACCTGGCATGTTGAACATGACTTTGTACGAGAAGATCAAACACCTCTTGTACAGCGCACAGCGCTGAGCTTAGCCGGT
ATAAGAGGGAAGGCGATGTC

Downstream 100 bases:

>100_bases
CACCGCGTTCCGGCCACAAGTCTGAAAAAGTTGAAAAGAAACGCCGCAGGCATGCTGCGATCCCCGTTTTATGCGCCGGG
TGCAGCCTCCCTGCGGGGAT

Product: dicarboxylate transporter

Products: NA

Alternate protein names: N-acetylneuraminic acid permease; N-acetylneuraminic acid transporter; Neu5Ac permease [H]

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MKGTRGQLVLRSIALLLIGTLMLLPLVLFLIERIFGFLTRGVGSEVFSAHEDFIFLFFSSSDAAVAQLAFVFSCVAGIYA
ARERKHLSVTLFSCDVDRPMHRVLSFLSAICTVAVLSACFFASGPNIVAVFRKEEAVWGVPLRWIFTALPCMYGALLFHY
AREVKCRTCVIVGLLVGVLISTGSIASVLFHLFDLTVPLLDSVFHGWVAVGTRLFWPFVLLLLLLAAQGLPLFITLLAIA
YLALSVDGGYVDTLPLEGYKILTDTGGIVAVPLFATASLLLARGSTGTRLLRLVKEAVGWLRGGAAVACVAVAALFTSLT
GVSGVTILALGSLFKLILTGNKYPEHDAEALITSSGAIGLLFPPSAAIIIFGATNILTVHIVDLFKGALLPGTLLVLSAM
CLGVAKDRTQVRPSFSWQLLVHAVRGSVFDLALPVCISLGYFSGTLNLLQCASLTTLLAFVLGTWVRRDFTVKEACATAL
ESLPIVGGILIIVAAAKGLSFYLVDANVPDTLIAFLQHAISSKYAFLLLLNVLLLGVGCIMDLYSAILVISPLVLPLAVH
FGVHPVHASVVFLMNLELGALTPPIGMNLFIASFAFEKPIVHLTRAIAPFLLAQLGVLLLTTYIPWLSTAFL

Sequences:

>Translated_632_residues
MKGTRGQLVLRSIALLLIGTLMLLPLVLFLIERIFGFLTRGVGSEVFSAHEDFIFLFFSSSDAAVAQLAFVFSCVAGIYA
ARERKHLSVTLFSCDVDRPMHRVLSFLSAICTVAVLSACFFASGPNIVAVFRKEEAVWGVPLRWIFTALPCMYGALLFHY
AREVKCRTCVIVGLLVGVLISTGSIASVLFHLFDLTVPLLDSVFHGWVAVGTRLFWPFVLLLLLLAAQGLPLFITLLAIA
YLALSVDGGYVDTLPLEGYKILTDTGGIVAVPLFATASLLLARGSTGTRLLRLVKEAVGWLRGGAAVACVAVAALFTSLT
GVSGVTILALGSLFKLILTGNKYPEHDAEALITSSGAIGLLFPPSAAIIIFGATNILTVHIVDLFKGALLPGTLLVLSAM
CLGVAKDRTQVRPSFSWQLLVHAVRGSVFDLALPVCISLGYFSGTLNLLQCASLTTLLAFVLGTWVRRDFTVKEACATAL
ESLPIVGGILIIVAAAKGLSFYLVDANVPDTLIAFLQHAISSKYAFLLLLNVLLLGVGCIMDLYSAILVISPLVLPLAVH
FGVHPVHASVVFLMNLELGALTPPIGMNLFIASFAFEKPIVHLTRAIAPFLLAQLGVLLLTTYIPWLSTAFL
>Mature_632_residues
MKGTRGQLVLRSIALLLIGTLMLLPLVLFLIERIFGFLTRGVGSEVFSAHEDFIFLFFSSSDAAVAQLAFVFSCVAGIYA
ARERKHLSVTLFSCDVDRPMHRVLSFLSAICTVAVLSACFFASGPNIVAVFRKEEAVWGVPLRWIFTALPCMYGALLFHY
AREVKCRTCVIVGLLVGVLISTGSIASVLFHLFDLTVPLLDSVFHGWVAVGTRLFWPFVLLLLLLAAQGLPLFITLLAIA
YLALSVDGGYVDTLPLEGYKILTDTGGIVAVPLFATASLLLARGSTGTRLLRLVKEAVGWLRGGAAVACVAVAALFTSLT
GVSGVTILALGSLFKLILTGNKYPEHDAEALITSSGAIGLLFPPSAAIIIFGATNILTVHIVDLFKGALLPGTLLVLSAM
CLGVAKDRTQVRPSFSWQLLVHAVRGSVFDLALPVCISLGYFSGTLNLLQCASLTTLLAFVLGTWVRRDFTVKEACATAL
ESLPIVGGILIIVAAAKGLSFYLVDANVPDTLIAFLQHAISSKYAFLLLLNVLLLGVGCIMDLYSAILVISPLVLPLAVH
FGVHPVHASVVFLMNLELGALTPPIGMNLFIASFAFEKPIVHLTRAIAPFLLAQLGVLLLTTYIPWLSTAFL

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid [H]

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=333, Percent_Identity=25.8258258258258, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR007387
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM; PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 67589; Mature: 67589

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTRGQLVLRSIALLLIGTLMLLPLVLFLIERIFGFLTRGVGSEVFSAHEDFIFLFFSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECC
SDAAVAQLAFVFSCVAGIYAARERKHLSVTLFSCDVDRPMHRVLSFLSAICTVAVLSACF
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FASGPNIVAVFRKEEAVWGVPLRWIFTALPCMYGALLFHYAREVKCRTCVIVGLLVGVLI
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STGSIASVLFHLFDLTVPLLDSVFHGWVAVGTRLFWPFVLLLLLLAAQGLPLFITLLAIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLALSVDGGYVDTLPLEGYKILTDTGGIVAVPLFATASLLLARGSTGTRLLRLVKEAVGW
HHHHCCCCCEEECCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRGGAAVACVAVAALFTSLTGVSGVTILALGSLFKLILTGNKYPEHDAEALITSSGAIGL
HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCEEE
LFPPSAAIIIFGATNILTVHIVDLFKGALLPGTLLVLSAMCLGVAKDRTQVRPSFSWQLL
EECCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH
VHAVRGSVFDLALPVCISLGYFSGTLNLLQCASLTTLLAFVLGTWVRRDFTVKEACATAL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ESLPIVGGILIIVAAAKGLSFYLVDANVPDTLIAFLQHAISSKYAFLLLLNVLLLGVGCI
HHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDLYSAILVISPLVLPLAVHFGVHPVHASVVFLMNLELGALTPPIGMNLFIASFAFEKPI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH
VHLTRAIAPFLLAQLGVLLLTTYIPWLSTAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGTRGQLVLRSIALLLIGTLMLLPLVLFLIERIFGFLTRGVGSEVFSAHEDFIFLFFSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECC
SDAAVAQLAFVFSCVAGIYAARERKHLSVTLFSCDVDRPMHRVLSFLSAICTVAVLSACF
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FASGPNIVAVFRKEEAVWGVPLRWIFTALPCMYGALLFHYAREVKCRTCVIVGLLVGVLI
HCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STGSIASVLFHLFDLTVPLLDSVFHGWVAVGTRLFWPFVLLLLLLAAQGLPLFITLLAIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YLALSVDGGYVDTLPLEGYKILTDTGGIVAVPLFATASLLLARGSTGTRLLRLVKEAVGW
HHHHCCCCCEEECCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LRGGAAVACVAVAALFTSLTGVSGVTILALGSLFKLILTGNKYPEHDAEALITSSGAIGL
HCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCEEE
LFPPSAAIIIFGATNILTVHIVDLFKGALLPGTLLVLSAMCLGVAKDRTQVRPSFSWQLL
EECCCCEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCHHHHHH
VHAVRGSVFDLALPVCISLGYFSGTLNLLQCASLTTLLAFVLGTWVRRDFTVKEACATAL
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ESLPIVGGILIIVAAAKGLSFYLVDANVPDTLIAFLQHAISSKYAFLLLLNVLLLGVGCI
HHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDLYSAILVISPLVLPLAVHFGVHPVHASVVFLMNLELGALTPPIGMNLFIASFAFEKPI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHH
VHLTRAIAPFLLAQLGVLLLTTYIPWLSTAFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]