Click here to switch to the map view.

The map label for this gene is 189026179

Identifier: 189026179

GI number: 189026179

Start: 1038457

End: 1039428

Strand: Direct

Name: 189026179

Synonym: TPASS_0956

Alternate gene names: NA

Gene position: 1038457-1039428 (Clockwise)

Preceding gene: 189026169

Following gene: 189026180

Centisome position: 91.14

GC content: 56.07

Gene sequence:

>972_bases
ATGAAACACCCCTCGGTGCGCGTATGCTGCTTTGCGTTCGCATCCTGTCTTCTTTGTGCAGGCTGTTCACTGAAAAGGCT
CGCCTTTTCCTCTCTCTCCCACACGCTCGCTCCCTTTCCTGAGGGGGAACTGGACGCGCACCTTTCGGACGCCGATTTTA
CGCGCGTTTTCACCGAGGAAGATGATCTTGATTTAGTCGCCCAGTCCCTCCCACTGGTGCTCAAGGTGTACGAAGCGCTG
CATCTGCAGAATCCCGCGCACAGAGGACTATCCCTCGCTGTCGGCAGGCTCTATATCATGTACGCTAATGCTTTTGTCCA
GACCCCTGCTCAGTATTTGCCAGAAGACGAGTTTGAGGCGCAGAACGAAGCCTATTCGCGCGCGAGGAAACTGTATTTGC
GTGGCGCGCGCTATGCGCTCTCCTCGCTAGAAACCGCATATCCGGGCTTCACCCGTGAGGTATTCTCCGGGGATGAGCAA
CGGTTGCACAAGGTACTTTCTCGCTGTACGCGTGTGGATGTGGGCACCCTTTACTGGGTAGGTACGGGGTACGTGGCGGC
GTTCGCCCTTACCCCTCTGGGAAGCGCGCTCCCAGACACCGTGCATGCGGCGGTGATGATGCTTGAGAGAGCCTGCGATC
TGTGGCCTTCGTATCAGGAAGGAGCAGTCTGGAACGTACTGACCAAGTTTTACGCCGCAGCACCAGAGTCTTTCGGTGGG
GGGATGGAGAAGGCACATACCGCGTTCGAACACCTTACGCGGTACTGCAGCGCGCACGACCCTGATCACCACATCACATA
CGCTGATGCGCTGTGCATACCCCTTAACAATCGTGCAGGTTTTGACGAGGCACTCGATCGCGCTCTTGCCATTGACCCTG
AGTCGGTGCCGCATAATAAACTACTGGTGATCCTTTCTCAAAAGCGTGCACGTTGGTTAAAGGCGCACGTGCAGGATTTT
TTCTTGGATTGA

Upstream 100 bases:

>100_bases
GTCAAATCGGTCTGGACGCTACCATAGCCGCGTACGAGCAGTTTCTGTGCGAGTGGAGACGCCAGCTGAGCACTGCCTCG
CCCCTGAGCATGGAAAAGAA

Downstream 100 bases:

>100_bases
GAATAAGCAGAATTCGTGGTGCAGGTAGTCTCCCTGCACAGGACGCGCGTTCTTGTGTAAAAAATTACTTTTTGCAAAAG
GAATATCTGTATGCGAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKHPSVRVCCFAFASCLLCAGCSLKRLAFSSLSHTLAPFPEGELDAHLSDADFTRVFTEEDDLDLVAQSLPLVLKVYEAL
HLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQ
RLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG
GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHVQDF
FLD

Sequences:

>Translated_323_residues
MKHPSVRVCCFAFASCLLCAGCSLKRLAFSSLSHTLAPFPEGELDAHLSDADFTRVFTEEDDLDLVAQSLPLVLKVYEAL
HLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQ
RLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG
GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHVQDF
FLD
>Mature_323_residues
MKHPSVRVCCFAFASCLLCAGCSLKRLAFSSLSHTLAPFPEGELDAHLSDADFTRVFTEEDDLDLVAQSLPLVLKVYEAL
HLQNPAHRGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQ
RLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG
GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILSQKRARWLKAHVQDF
FLD

Specific function: Unknown

COG id: COG5660

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y956_TREPA (O83922)

Other databases:

- EMBL:   AE000520
- PIR:   G71258
- RefSeq:   NP_219393.1
- ProteinModelPortal:   O83922
- IntAct:   O83922
- GeneID:   2611588
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0956
- NMPDR:   fig|243276.1.peg.951
- TIGR:   TP_0956
- HOGENOM:   HBG251098
- OMA:   QYAYAFV
- ProtClustDB:   CLSK355963
- BioCyc:   TPAL243276:TP_0956-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36005; Mature: 36005

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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EEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876