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The map label for this gene is gidB

Identifier: 189026169

GI number: 189026169

Start: 1029281

End: 1029949

Strand: Direct

Name: gidB

Synonym: TPASS_0946

Alternate gene names: 189026169

Gene position: 1029281-1029949 (Clockwise)

Preceding gene: 189026157

Following gene: 189026179

Centisome position: 90.33

GC content: 57.25

Gene sequence:

>669_bases
ATGGTGACTCCGAGCCAACACGCGCTCCTTGCAGAAGGCGTAGCACACCTAACGGACGCGCGCACCGCACCTGCTCTTTG
CGCTCTCCTGAAACAGTATTTGGAAGAACTTATTCTCTTTAACACGCGCGCACACCTGGTGCATGTAACACACACAGAGG
AACTTATCACACACCACCTATTAGACAGCCTCAGCGCCTGGCCACATTTCACCAACGCGCGCGCTATCGCCGACATCGGA
TCTGGCGCGGGCTTGCCAGGGATCCCGCTTGCCTGCGCACTCGCGTTGTATGCACCAGAAACAGAACTGACGCTCATCGA
GCGGCGTGAGAAACGCATAGCATTCCTTGAAAATGCCTGCGCGCGTCTGGCGCTCCCCCACCTTCGTATCGTGCATGCGG
ACGCGCACGACCTCACTCCCTACACGTATGACGCAATCACCTTTCGCGCTCTGTGTCCCCTCAACCACCCAACGGTATAT
ATGCTCCTGAACAAACTGCGCCCTGGCGGCGTAATACTCGCGTACAAAGGGAAGAGAAAACTCATCGAACAGGAAACGCG
TGATTTCCTCCCACAGTCTTGCTCTGTCTTCCCCCTCCATGTTCCCTTCCTCCACGAAGCACGGCACCTCGTTGCCATAC
ACACACCCTGCGCAGCGCCTCCCCAGTGA

Upstream 100 bases:

>100_bases
GAACAACCCCAAACATTCAAGACAGTGTCCTGCTTATCCTGTTTTATTTGCGCCTAAACCGATAGAAAAATATCCTTCCC
GCGGGTAGGCTGACCCCGTC

Downstream 100 bases:

>100_bases
CACAGGAGCACAGCAGAGAGGAGAACATACAAACGGCATGCCCATTATTTGGACGCTGCGGATACCCGTTTTCGCAGCTG
GTCGAACTGCGCCTGATCGC

Product: glucose-inhibited division protein B

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase; Glucose-inhibited division protein B

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MVTPSQHALLAEGVAHLTDARTAPALCALLKQYLEELILFNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIG
SGAGLPGIPLACALALYAPETELTLIERREKRIAFLENACARLALPHLRIVHADAHDLTPYTYDAITFRALCPLNHPTVY
MLLNKLRPGGVILAYKGKRKLIEQETRDFLPQSCSVFPLHVPFLHEARHLVAIHTPCAAPPQ

Sequences:

>Translated_222_residues
MVTPSQHALLAEGVAHLTDARTAPALCALLKQYLEELILFNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIG
SGAGLPGIPLACALALYAPETELTLIERREKRIAFLENACARLALPHLRIVHADAHDLTPYTYDAITFRALCPLNHPTVY
MLLNKLRPGGVILAYKGKRKLIEQETRDFLPQSCSVFPLHVPFLHEARHLVAIHTPCAAPPQ
>Mature_222_residues
MVTPSQHALLAEGVAHLTDARTAPALCALLKQYLEELILFNTRAHLVHVTHTEELITHHLLDSLSAWPHFTNARAIADIG
SGAGLPGIPLACALALYAPETELTLIERREKRIAFLENACARLALPHLRIVHADAHDLTPYTYDAITFRALCPLNHPTVY
MLLNKLRPGGVILAYKGKRKLIEQETRDFLPQSCSVFPLHVPFLHEARHLVAIHTPCAAPPQ

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=209, Percent_Identity=30.622009569378, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_TREPA (O66106)

Other databases:

- EMBL:   U97573
- EMBL:   AE000520
- PIR:   H71260
- RefSeq:   NP_219382.1
- ProteinModelPortal:   O66106
- SMR:   O66106
- IntAct:   O66106
- GeneID:   2611812
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0946
- NMPDR:   fig|243276.1.peg.940
- TIGR:   TP_0946
- HOGENOM:   HBG686577
- OMA:   FITIRAF
- ProtClustDB:   CLSK218940
- BioCyc:   TPAL243276:TP_0946-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 24587; Mature: 24587

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPSQHALLAEGVAHLTDARTAPALCALLKQYLEELILFNTRAHLVHVTHTEELITHHL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
LDSLSAWPHFTNARAIADIGSGAGLPGIPLACALALYAPETELTLIERREKRIAFLENAC
HHHHHCCCCCCCCHHHEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ARLALPHLRIVHADAHDLTPYTYDAITFRALCPLNHPTVYMLLNKLRPGGVILAYKGKRK
HHHCCCCEEEEECCCCCCCCCEEHHHHEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHH
LIEQETRDFLPQSCSVFPLHVPFLHEARHLVAIHTPCAAPPQ
HHHHHHHHHCCCCCCEEEEECCHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MVTPSQHALLAEGVAHLTDARTAPALCALLKQYLEELILFNTRAHLVHVTHTEELITHHL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
LDSLSAWPHFTNARAIADIGSGAGLPGIPLACALALYAPETELTLIERREKRIAFLENAC
HHHHHCCCCCCCCHHHEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ARLALPHLRIVHADAHDLTPYTYDAITFRALCPLNHPTVYMLLNKLRPGGVILAYKGKRK
HHHCCCCEEEEECCCCCCCCCEEHHHHEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHH
LIEQETRDFLPQSCSVFPLHVPFLHEARHLVAIHTPCAAPPQ
HHHHHHHHHCCCCCCEEEEECCHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876