| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026153
Identifier: 189026153
GI number: 189026153
Start: 1011596
End: 1013317
Strand: Direct
Name: 189026153
Synonym: TPASS_0930
Alternate gene names: NA
Gene position: 1011596-1013317 (Clockwise)
Preceding gene: 189026152
Following gene: 189026157
Centisome position: 88.78
GC content: 50.64
Gene sequence:
>1722_bases GTGCGTTTCCCTTCTATGGGTACATCTGACGTCGCTGGCGTGCGTGGCGACGTTCCCTCGCTCCCGCCGCGTCTTATCAA GACACAAAACGGCTTCACCGTTCTTTACCGCAACACCTACCTTTACTCAAAGTATCGCGCACAGGATGCGCATGAGCGCG CCGTGGCGCGCTTAGCGGTCAAGCCGCATACCCTTGTACTTTGTTGCGCGCCAGTGCTTGGCCACGGCCTATGTGCGCTT CTTACTCGTATGCCTCCTTCCTCATTTCTCCTCTGTCTTGAATGTGACCTGCAGCTTATGCACCTTTTTATGCAGCACGC TCCGCGCCAGCTTATCACCGCACAGAATGTGTACGTGTTATACACCACACACATCACCCAAGTGCTGCATACCGTGGAGC GTCTCACCCGCTTCCCTTTCAAACAGATACTGAAAATTGCGGGATCCGGCGCATATGCGCAGTACCGGAATTTTTATGAC GAAAGCGAGCAAAACATACGCACTCTCATCGACACCTTTTGGATCAATAAGATTACACTCATCCATTCAGGAAGGAATTA TGCGCGCAATATATTCTCAAATTATATTACGCAATTACAAAATCCCTCGCACATACACCACCTTGTTCCCCAGAGTATAG ACAAACCACTCCTTATCGTAGGTGCCGGTCCTGCGCTGGATGCCTGCCGTTCTTTTTGTGCCCGCATGAAGGACACCATC TTTTTACTTGCCGTAGATGTGGCGTGCAACGCACTGTTACCTGACATTGTTCCAGATGCAGTTGTCTTATTAGAATCACA GTTCTGGATTGAACAAGCATTCATAGGTACACTCCCGCGCACCGTTGCGCTCTTTGCGGATCTAAGCGCATTTCCCCGTG CGGTGCGTGCAGCGAACGTGCCTACACACTTCTTTTTCACCCCGTACACTCATGCCGCATTTATCAAACGTGCGCAGAAT GCGGGCGTCGTGCCGCTTTCCATTCATCCTAGTGGATCAGTAGGACTCGCCGCGTTGCAACTTGCACTCCGATTGAGAAA AAAGGGAGTTCCTATTTTTCACACCGGTTTAAATTTTTCATGGAACAAGGGATTTACCCATGCGAGGGGAAGTGCTCCAG TACAAAGACTGTACCACAGCACAACGCGCCTCCATAGCCTATATCCGGACTGTGCGCTGTTCCCAGAAGGGATACGCTCC CTTAAGGGGAAAAGATACGCGGTACAAAGTATCCCCAACCTTGTGCACTATGCACACGCTTATCGTACCCTCTGCGCTGA GCACCCGCACCTTTACGATCTAGACCAAGAAGGTCTTGCTCTTACCACATCACACACAGTCTCGCACGCACAGGCGTGTG AGATCATCACCCACTGCTGTACGCGCAGACATAGAACGCATGTACCCATTTTGCACACACAAGACGCACAGATATCCTTT GCGTTTTCTCAAAAACCTGCAGAGGACTTTTGTCTACGCGTAAAAGAACTATTGACCACAGAGCGCGCAGCGTTGCTCCA GCTCAAGCACATGCTCACCACGGCTACACCTTCTAACCAAGACGTTATCCGCGCGCTCATACGGAGAAGCGACTACCTCT ACTTGCATTTTCCCGATGGAGAGCGCGCAGAATATTTAGAATATAATTTCCTCTGCCGTGTACGTGCAGAACTTGATTTC TTTCTTAAGCTCCTCAGCCGCATCCCATCTTCTCTGGACTAA
Upstream 100 bases:
>100_bases CACAGGAATCGGTCGTAGATACTATCCTGGCTCATCCCTCATTTAAGGATACATTTGACAATATCTTTCGGCGCTAGCCC TGTGCGTGGCGCGGCTGTGA
Downstream 100 bases:
>100_bases GGGCTAGCAGAACTTTCTCCGCCACTGGAGAAAACGCAGTACGTCGCGCAGCACCCACGCGCCGTAAAACATTTCTTATC GCACTATAACTTATCGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF FLKLLSRIPSSLD
Sequences:
>Translated_573_residues MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF FLKLLSRIPSSLD >Mature_573_residues MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF FLKLLSRIPSSLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y930_TREPA (O83900)
Other databases:
- EMBL: AE000520 - PIR: C71264 - RefSeq: NP_219366.1 - ProteinModelPortal: O83900 - GeneID: 2611606 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0930 - NMPDR: fig|243276.1.peg.924 - TIGR: TP_0930 - HOGENOM: HBG732168 - OMA: ISSIVIQ - ProtClustDB: CLSK218930 - BioCyc: TPAL243276:TP_0930-MONOMER - InterPro: IPR002826
Pfam domain/function: PF01973 DUF115
EC number: NA
Molecular weight: Translated: 64725; Mature: 64725
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAV CCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECEEEEHHHHHCHHHHHHHHHHHC KPHTLVLCCAPVLGHGLCALLTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVL CCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHCCEEEE YTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYDESEQNIRTLIDTFWINKITL EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEE IHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI EECCCHHHHHHHHHHHHHCCCCHHHHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHE FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANV EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTHFFFTPYTHAAFIKRAQNAGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFS CCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC WNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRSLKGKRYAVQSIPNLVHYAHA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH YRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF HHHHHHCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC ERAEYLEYNFLCRVRAELDFFLKLLSRIPSSLD CCCHHEEHHHHEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAV CCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECEEEEHHHHHCHHHHHHHHHHHC KPHTLVLCCAPVLGHGLCALLTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVL CCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHCCEEEE YTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYDESEQNIRTLIDTFWINKITL EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEE IHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI EECCCHHHHHHHHHHHHHCCCCHHHHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHE FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANV EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTHFFFTPYTHAAFIKRAQNAGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFS CCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC WNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRSLKGKRYAVQSIPNLVHYAHA CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH YRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF HHHHHHCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDG EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC ERAEYLEYNFLCRVRAELDFFLKLLSRIPSSLD CCCHHEEHHHHEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876