| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189026157
Identifier: 189026157
GI number: 189026157
Start: 1016701
End: 1017924
Strand: Direct
Name: 189026157
Synonym: TPASS_0934
Alternate gene names: NA
Gene position: 1016701-1017924 (Clockwise)
Preceding gene: 189026153
Following gene: 189026169
Centisome position: 89.23
GC content: 49.18
Gene sequence:
>1224_bases ATGAAAATTTGGCTCAAATTTTTTGTCGGCAGTTGCATTGGTGCACTGGTAGCCTACACTATCCCAGAAACGCTCAGCGC GCCGCTCATGCAGACCATTTCAGAATTGGTTGTATCCGCTGGGAGTTACATGCTTTATCCAGTTATTTTTTTTGGATTCA GTGTCAGTATTTTTGAGATGCGTCGAGAACGCCTACTCCTGCGTACTACCCTTATCAGCATAGGTGCATGTGTTGCCACC GCATTTAGCCTTTCTTTGGTAGGACTATTCTCGGTACTCGTGTACCGACCTGCGCGTATTCCCATTTTTGCCACCGGCAC GCCGCAGAATCCAGGGTTTCAAATCCGCACCTTTTTTTTGCAATTGTTCCCTGCAAGTAGTTTTGAAGTATTCACAAATG GTGATTATCTTCTCCCTCTCTGCGTATTTGCCAGTTTCGTCGGCGCCGGCTGCGCAGTCGATCATGTCGCGGCAAAACCC GTACTCGCGCTTTTTGAGTCACTAACGCGCGTCGCACACACCGTGATGGTCTTCTTCGTAGACATGCTGTCTATTGGATT TATTGCACTTTCTGCGCACTGGCTGTTTAGGTTTCGACCACTCCTTTCTACTGGGGTGTTCACTGACCTTGTAATCCTAC TGACACTGACAGCAATTTTTATCTGCAGCGTGCTCTATCCTGCCCTTATTAAAATTATGTGCCCTGAAGTCAATCCGTAT CGAGTACTGTATGCAGCATTGGCACCAATGAGCACGGCGTTCTTTTCGCAAAACGTGCACGCGACGCTCCCTGTCTTGCT CTATCACGCAGAGGAAAGTATAGGGGTGCAACGCACAACTGCAACGGTGCTGCTCTCTATCTTTTCGATCTTTGGCAGGG CCGGGTCAGCGTGCGCAATCACGATGAGCTTTGCCCTAATATTAAAGTCATATTCCCATTTGGGAATCGGCTTCTTCGAT GCGCTGTGGATTATAACTGCTGCATCATTTCTCTCCATTTTCTTAGGACGCTTTCCCACAGGAGGGGTCCTTATTGCGCT TGCGTCAATATGCGCGTGGTACGGACGAGGTTTTGGAAGCGGATACCTTGTCATCCGCCCTGCTGCATTTTTTGTTGGAA GCATCGCCACAACGCTGGATACCCTAAACGCCCTCATCTGCACCGCAATAAGCGCAGAACGAATTGGAACTGTGCGCCAC CGCGCGGTGCGTTTCTTTATCTGA
Upstream 100 bases:
>100_bases GGAACAATCTATTGTCAATGCTTTTTCAAAGAAGATCGCAAACGGTGGGGAAAGGCCATCTCGTTGACAGCCTTTTAGTG ATTAACTTACACTCCGCCGC
Downstream 100 bases:
>100_bases GCTCTAGTGATTGCACTGCAATAGCAGGAGACTCCAGCATTCGATGCGCCCACGCCCCCATACGCGCAACCGCTATGTGC GCACACGGCGACACACTTTC
Product: glutamate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKIWLKFFVGSCIGALVAYTIPETLSAPLMQTISELVVSAGSYMLYPVIFFGFSVSIFEMRRERLLLRTTLISIGACVAT AFSLSLVGLFSVLVYRPARIPIFATGTPQNPGFQIRTFFLQLFPASSFEVFTNGDYLLPLCVFASFVGAGCAVDHVAAKP VLALFESLTRVAHTVMVFFVDMLSIGFIALSAHWLFRFRPLLSTGVFTDLVILLTLTAIFICSVLYPALIKIMCPEVNPY RVLYAALAPMSTAFFSQNVHATLPVLLYHAEESIGVQRTTATVLLSIFSIFGRAGSACAITMSFALILKSYSHLGIGFFD ALWIITAASFLSIFLGRFPTGGVLIALASICAWYGRGFGSGYLVIRPAAFFVGSIATTLDTLNALICTAISAERIGTVRH RAVRFFI
Sequences:
>Translated_407_residues MKIWLKFFVGSCIGALVAYTIPETLSAPLMQTISELVVSAGSYMLYPVIFFGFSVSIFEMRRERLLLRTTLISIGACVAT AFSLSLVGLFSVLVYRPARIPIFATGTPQNPGFQIRTFFLQLFPASSFEVFTNGDYLLPLCVFASFVGAGCAVDHVAAKP VLALFESLTRVAHTVMVFFVDMLSIGFIALSAHWLFRFRPLLSTGVFTDLVILLTLTAIFICSVLYPALIKIMCPEVNPY RVLYAALAPMSTAFFSQNVHATLPVLLYHAEESIGVQRTTATVLLSIFSIFGRAGSACAITMSFALILKSYSHLGIGFFD ALWIITAASFLSIFLGRFPTGGVLIALASICAWYGRGFGSGYLVIRPAAFFVGSIATTLDTLNALICTAISAERIGTVRH RAVRFFI >Mature_407_residues MKIWLKFFVGSCIGALVAYTIPETLSAPLMQTISELVVSAGSYMLYPVIFFGFSVSIFEMRRERLLLRTTLISIGACVAT AFSLSLVGLFSVLVYRPARIPIFATGTPQNPGFQIRTFFLQLFPASSFEVFTNGDYLLPLCVFASFVGAGCAVDHVAAKP VLALFESLTRVAHTVMVFFVDMLSIGFIALSAHWLFRFRPLLSTGVFTDLVILLTLTAIFICSVLYPALIKIMCPEVNPY RVLYAALAPMSTAFFSQNVHATLPVLLYHAEESIGVQRTTATVLLSIFSIFGRAGSACAITMSFALILKSYSHLGIGFFD ALWIITAASFLSIFLGRFPTGGVLIALASICAWYGRGFGSGYLVIRPAAFFVGSIATTLDTLNALICTAISAERIGTVRH RAVRFFI
Specific function: Unknown
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44358; Mature: 44358
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWLKFFVGSCIGALVAYTIPETLSAPLMQTISELVVSAGSYMLYPVIFFGFSVSIFEM CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RRERLLLRTTLISIGACVATAFSLSLVGLFSVLVYRPARIPIFATGTPQNPGFQIRTFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH QLFPASSFEVFTNGDYLLPLCVFASFVGAGCAVDHVAAKPVLALFESLTRVAHTVMVFFV HHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLSIGFIALSAHWLFRFRPLLSTGVFTDLVILLTLTAIFICSVLYPALIKIMCPEVNPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RVLYAALAPMSTAFFSQNVHATLPVLLYHAEESIGVQRTTATVLLSIFSIFGRAGSACAI HHHHHHHHHHHHHHHCCCCHHHHHHHEEECHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH TMSFALILKSYSHLGIGFFDALWIITAASFLSIFLGRFPTGGVLIALASICAWYGRGFGS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC GYLVIRPAAFFVGSIATTLDTLNALICTAISAERIGTVRHRAVRFFI CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIWLKFFVGSCIGALVAYTIPETLSAPLMQTISELVVSAGSYMLYPVIFFGFSVSIFEM CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RRERLLLRTTLISIGACVATAFSLSLVGLFSVLVYRPARIPIFATGTPQNPGFQIRTFFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH QLFPASSFEVFTNGDYLLPLCVFASFVGAGCAVDHVAAKPVLALFESLTRVAHTVMVFFV HHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMLSIGFIALSAHWLFRFRPLLSTGVFTDLVILLTLTAIFICSVLYPALIKIMCPEVNPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RVLYAALAPMSTAFFSQNVHATLPVLLYHAEESIGVQRTTATVLLSIFSIFGRAGSACAI HHHHHHHHHHHHHHHCCCCHHHHHHHEEECHHHCCCHHHHHHHHHHHHHHHCCCCCHHHH TMSFALILKSYSHLGIGFFDALWIITAASFLSIFLGRFPTGGVLIALASICAWYGRGFGS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC GYLVIRPAAFFVGSIATTLDTLNALICTAISAERIGTVRHRAVRFFI CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA