Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026152

Identifier: 189026152

GI number: 189026152

Start: 1010802

End: 1011572

Strand: Direct

Name: 189026152

Synonym: TPASS_0929

Alternate gene names: NA

Gene position: 1010802-1011572 (Clockwise)

Preceding gene: 189026151

Following gene: 189026153

Centisome position: 88.71

GC content: 55.25

Gene sequence:

>771_bases
TTGTCTTTTGAAGACGCTGTCGCTACTGGCTCCACCAAAGTTGGTACCGATGCTACCGGAAAAATGACCCACTCCTATCG
GAGTGATGTGAACGAATTCTTTCCCGACGCGCAGGACTTGGACACGGTGCTCCGCACGGCGGTGGGAGCCTTGAGTCCTG
TAGTGAAGATAGAGCGCGGTTTTGCCATCGTGCGCACCGACGCTGAACCTAGCGCTCCGGACTTTAGTGACGCAGCAACG
CGGGAGCGCGTGTTCGCACACATGGCTCGTGTGGAGCGGGGCACCATCGAACGTTTCCTTGAGGAGGAAGCACATACCTT
TTCCACCCGGGCGAAACAGGGTGGATTCACCGCCGCCGCACAGAGCCTTAACTTAGACGTGCATACGAGTCGTTCCTTTC
CCATTAATTTCGGAAATGTCGACGTGCTCCCTGCCCTTCCGCGCCAGTCCGACCCCCCGTTAGCGCGGATTGCATATGAC
GAGAAATTTTTTTCCACCGCGTTCGCCCTTCTCCCCGGGCAGGTGTCTGACCCACTTATTCTTGATAGTTCCGTAGTACT
GCTCCAGTTACACGAGGAAAAGTCAGTGGACGAATCAGTGCTCGCTACTACCGGAGACAGCTATGCACACCATGTGCGCA
CTTGGTACCCGGGCTACCCGCTTGCGCTGCTAAACACGGCAAAGATGCCATGGGCACAGGAATCGGTCGTAGATACTATC
CTGGCTCATCCCTCATTTAAGGATACATTTGACAATATCTTTCGGCGCTAG

Upstream 100 bases:

>100_bases
AGAGCATGCCCACCTTTTTACCCTGCATCACCTTTCCTTGCTCACCTACTCCTCGGAAGAGGACGCGCGCCGCACGGCAC
GCGCTCTAGAGAAACGGGAA

Downstream 100 bases:

>100_bases
CCCTGTGCGTGGCGCGGCTGTGAGTGCGTTTCCCTTCTATGGGTACATCTGACGTCGCTGGCGTGCGTGGCGACGTTCCC
TCGCTCCCGCCGCGTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSFEDAVATGSTKVGTDATGKMTHSYRSDVNEFFPDAQDLDTVLRTAVGALSPVVKIERGFAIVRTDAEPSAPDFSDAAT
RERVFAHMARVERGTIERFLEEEAHTFSTRAKQGGFTAAAQSLNLDVHTSRSFPINFGNVDVLPALPRQSDPPLARIAYD
EKFFSTAFALLPGQVSDPLILDSSVVLLQLHEEKSVDESVLATTGDSYAHHVRTWYPGYPLALLNTAKMPWAQESVVDTI
LAHPSFKDTFDNIFRR

Sequences:

>Translated_256_residues
MSFEDAVATGSTKVGTDATGKMTHSYRSDVNEFFPDAQDLDTVLRTAVGALSPVVKIERGFAIVRTDAEPSAPDFSDAAT
RERVFAHMARVERGTIERFLEEEAHTFSTRAKQGGFTAAAQSLNLDVHTSRSFPINFGNVDVLPALPRQSDPPLARIAYD
EKFFSTAFALLPGQVSDPLILDSSVVLLQLHEEKSVDESVLATTGDSYAHHVRTWYPGYPLALLNTAKMPWAQESVVDTI
LAHPSFKDTFDNIFRR
>Mature_255_residues
SFEDAVATGSTKVGTDATGKMTHSYRSDVNEFFPDAQDLDTVLRTAVGALSPVVKIERGFAIVRTDAEPSAPDFSDAATR
ERVFAHMARVERGTIERFLEEEAHTFSTRAKQGGFTAAAQSLNLDVHTSRSFPINFGNVDVLPALPRQSDPPLARIAYDE
KFFSTAFALLPGQVSDPLILDSSVVLLQLHEEKSVDESVLATTGDSYAHHVRTWYPGYPLALLNTAKMPWAQESVVDTIL
AHPSFKDTFDNIFRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y929_TREPA (O83899)

Other databases:

- EMBL:   AE000520
- PIR:   B71264
- RefSeq:   NP_219365.1
- ProteinModelPortal:   O83899
- IntAct:   O83899
- GeneID:   2611549
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0929
- NMPDR:   fig|243276.1.peg.923
- TIGR:   TP_0929
- HOGENOM:   HBG732167
- ProtClustDB:   CLSK218929
- BioCyc:   TPAL243276:TP_0929-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28193; Mature: 28062

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFEDAVATGSTKVGTDATGKMTHSYRSDVNEFFPDAQDLDTVLRTAVGALSPVVKIERG
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
FAIVRTDAEPSAPDFSDAATRERVFAHMARVERGTIERFLEEEAHTFSTRAKQGGFTAAA
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSLNLDVHTSRSFPINFGNVDVLPALPRQSDPPLARIAYDEKFFSTAFALLPGQVSDPLI
HHCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEE
LDSSVVLLQLHEEKSVDESVLATTGDSYAHHVRTWYPGYPLALLNTAKMPWAQESVVDTI
ECCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHH
LAHPSFKDTFDNIFRR
HCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SFEDAVATGSTKVGTDATGKMTHSYRSDVNEFFPDAQDLDTVLRTAVGALSPVVKIERG
CCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
FAIVRTDAEPSAPDFSDAATRERVFAHMARVERGTIERFLEEEAHTFSTRAKQGGFTAAA
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QSLNLDVHTSRSFPINFGNVDVLPALPRQSDPPLARIAYDEKFFSTAFALLPGQVSDPLI
HHCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCEE
LDSSVVLLQLHEEKSVDESVLATTGDSYAHHVRTWYPGYPLALLNTAKMPWAQESVVDTI
ECCCEEEEEECCCCCCCHHHHHCCCCHHHHHHHEECCCCCCHHHCCCCCCCHHHHHHHHH
LAHPSFKDTFDNIFRR
HCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876