Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026153

Identifier: 189026153

GI number: 189026153

Start: 1011596

End: 1013317

Strand: Direct

Name: 189026153

Synonym: TPASS_0930

Alternate gene names: NA

Gene position: 1011596-1013317 (Clockwise)

Preceding gene: 189026152

Following gene: 189026157

Centisome position: 88.78

GC content: 50.64

Gene sequence:

>1722_bases
GTGCGTTTCCCTTCTATGGGTACATCTGACGTCGCTGGCGTGCGTGGCGACGTTCCCTCGCTCCCGCCGCGTCTTATCAA
GACACAAAACGGCTTCACCGTTCTTTACCGCAACACCTACCTTTACTCAAAGTATCGCGCACAGGATGCGCATGAGCGCG
CCGTGGCGCGCTTAGCGGTCAAGCCGCATACCCTTGTACTTTGTTGCGCGCCAGTGCTTGGCCACGGCCTATGTGCGCTT
CTTACTCGTATGCCTCCTTCCTCATTTCTCCTCTGTCTTGAATGTGACCTGCAGCTTATGCACCTTTTTATGCAGCACGC
TCCGCGCCAGCTTATCACCGCACAGAATGTGTACGTGTTATACACCACACACATCACCCAAGTGCTGCATACCGTGGAGC
GTCTCACCCGCTTCCCTTTCAAACAGATACTGAAAATTGCGGGATCCGGCGCATATGCGCAGTACCGGAATTTTTATGAC
GAAAGCGAGCAAAACATACGCACTCTCATCGACACCTTTTGGATCAATAAGATTACACTCATCCATTCAGGAAGGAATTA
TGCGCGCAATATATTCTCAAATTATATTACGCAATTACAAAATCCCTCGCACATACACCACCTTGTTCCCCAGAGTATAG
ACAAACCACTCCTTATCGTAGGTGCCGGTCCTGCGCTGGATGCCTGCCGTTCTTTTTGTGCCCGCATGAAGGACACCATC
TTTTTACTTGCCGTAGATGTGGCGTGCAACGCACTGTTACCTGACATTGTTCCAGATGCAGTTGTCTTATTAGAATCACA
GTTCTGGATTGAACAAGCATTCATAGGTACACTCCCGCGCACCGTTGCGCTCTTTGCGGATCTAAGCGCATTTCCCCGTG
CGGTGCGTGCAGCGAACGTGCCTACACACTTCTTTTTCACCCCGTACACTCATGCCGCATTTATCAAACGTGCGCAGAAT
GCGGGCGTCGTGCCGCTTTCCATTCATCCTAGTGGATCAGTAGGACTCGCCGCGTTGCAACTTGCACTCCGATTGAGAAA
AAAGGGAGTTCCTATTTTTCACACCGGTTTAAATTTTTCATGGAACAAGGGATTTACCCATGCGAGGGGAAGTGCTCCAG
TACAAAGACTGTACCACAGCACAACGCGCCTCCATAGCCTATATCCGGACTGTGCGCTGTTCCCAGAAGGGATACGCTCC
CTTAAGGGGAAAAGATACGCGGTACAAAGTATCCCCAACCTTGTGCACTATGCACACGCTTATCGTACCCTCTGCGCTGA
GCACCCGCACCTTTACGATCTAGACCAAGAAGGTCTTGCTCTTACCACATCACACACAGTCTCGCACGCACAGGCGTGTG
AGATCATCACCCACTGCTGTACGCGCAGACATAGAACGCATGTACCCATTTTGCACACACAAGACGCACAGATATCCTTT
GCGTTTTCTCAAAAACCTGCAGAGGACTTTTGTCTACGCGTAAAAGAACTATTGACCACAGAGCGCGCAGCGTTGCTCCA
GCTCAAGCACATGCTCACCACGGCTACACCTTCTAACCAAGACGTTATCCGCGCGCTCATACGGAGAAGCGACTACCTCT
ACTTGCATTTTCCCGATGGAGAGCGCGCAGAATATTTAGAATATAATTTCCTCTGCCGTGTACGTGCAGAACTTGATTTC
TTTCTTAAGCTCCTCAGCCGCATCCCATCTTCTCTGGACTAA

Upstream 100 bases:

>100_bases
CACAGGAATCGGTCGTAGATACTATCCTGGCTCATCCCTCATTTAAGGATACATTTGACAATATCTTTCGGCGCTAGCCC
TGTGCGTGGCGCGGCTGTGA

Downstream 100 bases:

>100_bases
GGGCTAGCAGAACTTTCTCCGCCACTGGAGAAAACGCAGTACGTCGCGCAGCACCCACGCGCCGTAAAACATTTCTTATC
GCACTATAACTTATCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 573; Mature: 573

Protein sequence:

>573_residues
MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL
LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD
ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI
FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN
AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS
LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF
AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF
FLKLLSRIPSSLD

Sequences:

>Translated_573_residues
MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL
LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD
ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI
FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN
AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS
LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF
AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF
FLKLLSRIPSSLD
>Mature_573_residues
MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAVKPHTLVLCCAPVLGHGLCAL
LTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVLYTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYD
ESEQNIRTLIDTFWINKITLIHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI
FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANVPTHFFFTPYTHAAFIKRAQN
AGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFSWNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRS
LKGKRYAVQSIPNLVHYAHAYRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF
AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDGERAEYLEYNFLCRVRAELDF
FLKLLSRIPSSLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y930_TREPA (O83900)

Other databases:

- EMBL:   AE000520
- PIR:   C71264
- RefSeq:   NP_219366.1
- ProteinModelPortal:   O83900
- GeneID:   2611606
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0930
- NMPDR:   fig|243276.1.peg.924
- TIGR:   TP_0930
- HOGENOM:   HBG732168
- OMA:   ISSIVIQ
- ProtClustDB:   CLSK218930
- BioCyc:   TPAL243276:TP_0930-MONOMER
- InterPro:   IPR002826

Pfam domain/function: PF01973 DUF115

EC number: NA

Molecular weight: Translated: 64725; Mature: 64725

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAV
CCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECEEEEHHHHHCHHHHHHHHHHHC
KPHTLVLCCAPVLGHGLCALLTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVL
CCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHCCEEEE
YTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYDESEQNIRTLIDTFWINKITL
EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
IHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI
EECCCHHHHHHHHHHHHHCCCCHHHHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHE
FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANV
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTHFFFTPYTHAAFIKRAQNAGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFS
CCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC
WNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRSLKGKRYAVQSIPNLVHYAHA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH
YRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF
HHHHHHCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE
AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC
ERAEYLEYNFLCRVRAELDFFLKLLSRIPSSLD
CCCHHEEHHHHEEHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRFPSMGTSDVAGVRGDVPSLPPRLIKTQNGFTVLYRNTYLYSKYRAQDAHERAVARLAV
CCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEECEEEEHHHHHCHHHHHHHHHHHC
KPHTLVLCCAPVLGHGLCALLTRMPPSSFLLCLECDLQLMHLFMQHAPRQLITAQNVYVL
CCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHCCEEEE
YTTHITQVLHTVERLTRFPFKQILKIAGSGAYAQYRNFYDESEQNIRTLIDTFWINKITL
EHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
IHSGRNYARNIFSNYITQLQNPSHIHHLVPQSIDKPLLIVGAGPALDACRSFCARMKDTI
EECCCHHHHHHHHHHHHHCCCCHHHHHHCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHE
FLLAVDVACNALLPDIVPDAVVLLESQFWIEQAFIGTLPRTVALFADLSAFPRAVRAANV
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTHFFFTPYTHAAFIKRAQNAGVVPLSIHPSGSVGLAALQLALRLRKKGVPIFHTGLNFS
CCEEEECCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC
WNKGFTHARGSAPVQRLYHSTTRLHSLYPDCALFPEGIRSLKGKRYAVQSIPNLVHYAHA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCHHHHHHCCCCHHHHHHHHHHHHHHHH
YRTLCAEHPHLYDLDQEGLALTTSHTVSHAQACEIITHCCTRRHRTHVPILHTQDAQISF
HHHHHHCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEE
AFSQKPAEDFCLRVKELLTTERAALLQLKHMLTTATPSNQDVIRALIRRSDYLYLHFPDG
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCC
ERAEYLEYNFLCRVRAELDFFLKLLSRIPSSLD
CCCHHEEHHHHEEHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876