Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026135

Identifier: 189026135

GI number: 189026135

Start: 991634

End: 992956

Strand: Direct

Name: 189026135

Synonym: TPASS_0912

Alternate gene names: NA

Gene position: 991634-992956 (Clockwise)

Preceding gene: 189026134

Following gene: 189026136

Centisome position: 87.03

GC content: 47.69

Gene sequence:

>1323_bases
GTGTGCATAAGACGTGGTATTAACCCGTGCGCACCGATGCCGAAGATAAGGCGGGTAAAGAGGTACAGGTCCATGTCACA
AAAAATCGATGTATCTGAACTGCAAGAAGGAATGTGTTTTTCCGAGCCCGTGTTCTTCGACGACGGAGAAAACCTCCTCC
TCAGGGAAGGGGAGCCGGTAAGCACTCGAGAGCTGACGGTGCTCCAGGATTGGAATATTCCCTACGTTGTGACCGCAGGT
AGGGTGCTGGCTGAAGGGGAGTCAGTTCCCTCTTCTACCGTGGAGGAATTAGCAGAATTTGAAGAGCTTGCAGCAGAAGA
ACTGCTTGATCCTGAAGACGATATCGTTTCCACCGGAGAACTCCGTACTCAAGATATCCTGAAGGATATTTGTGAACTCC
TTCCTAAGGTGTGTATCAATCCCCACTATCATGAAGAATACGTTGGCTTTATTCAGGAATTGAACATGCTTTTTGCCAAG
ATGAATGCGCACACGACACTTCCTGCGCGCCCTGCGGACATGCTTGCAAAGCGCCTTTCAGAATTAGTTCGAGCAAATAC
ACTCGGGTTTGTCAGTTTAGTGCTGTCATACAAAATCGAAGGATTTCGATTTGCAAAACCTGCAGTAGATACGGCTATCT
TTTCCATTATCGTTGCGCAGCATTTGGGTTTTTCTGAAAAAGATATATTTGATTTGGTCGTTGCCTCACTCCTGCACGAT
ATCGGTATGCAGCATGTTCCTGCCGACATCTTGAAGAAGTCGGGGAGATTGCATTTTCAAGAACAGCAGGCAGTTGACGC
GCACACCATTTACGCACATTCCTACATCGTAAACACGCTCAAATACCCGAACTCGGTTGGACTGAGTGTACTCCAGCACC
ATGAACACTGGAATGGAAAAGGGTATCCCCAGTCTCTTTCTGGAAACAAAATTACCATCGGTGCGAGGATTCTTGCAGTT
ACTGATGCCTTTGCTGCAATGCTTGCGCCAAAGTCGTATCGCAAACCGTTCAGTGGCTATCAAGCAATGAAAAGCTTACT
TGCTGACAACGCACGTCGCTTTGATCCAGACGTAATCAAGGCAATGATTCAAAGCGTCGGTATTTACCCCATTGGGTCGT
TGGTGCTCCTGAATAACTCAGCAGTTGCGCGCGTGGTAAAGACCACGGCCACGGCGCCGTTGCGTCCGTGTTTAAGAATA
GTTATCGACGAGCACGACGTAACCCATCCTGACGACAGCGGTGAGTTCATTGATTTAGCGGTCAATAAAACGAATTACAT
TGTAGGAGAAGTGAGTCCGTGGAGTTATGCCAAAGCACAATAA

Upstream 100 bases:

>100_bases
GTCTGAGCACAGGATAGGTGCGTGTATCCCACCGGAAACCTATCAGGTTGTCTCTGCAATCTTTGCCTTTTTGTACACAC
AACAGTAACGTTACCGCTGT

Downstream 100 bases:

>100_bases
GTTACTCGGTGCATTTGGAGAGGCGTATGCGGCGCGCTGGCTAGCGACGCGCGGATATATTATCATCACACGAAACTGGC
GCAGAGCAACAGGTGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MCIRRGINPCAPMPKIRRVKRYRSMSQKIDVSELQEGMCFSEPVFFDDGENLLLREGEPVSTRELTVLQDWNIPYVVTAG
RVLAEGESVPSSTVEELAEFEELAAEELLDPEDDIVSTGELRTQDILKDICELLPKVCINPHYHEEYVGFIQELNMLFAK
MNAHTTLPARPADMLAKRLSELVRANTLGFVSLVLSYKIEGFRFAKPAVDTAIFSIIVAQHLGFSEKDIFDLVVASLLHD
IGMQHVPADILKKSGRLHFQEQQAVDAHTIYAHSYIVNTLKYPNSVGLSVLQHHEHWNGKGYPQSLSGNKITIGARILAV
TDAFAAMLAPKSYRKPFSGYQAMKSLLADNARRFDPDVIKAMIQSVGIYPIGSLVLLNNSAVARVVKTTATAPLRPCLRI
VIDEHDVTHPDDSGEFIDLAVNKTNYIVGEVSPWSYAKAQ

Sequences:

>Translated_440_residues
MCIRRGINPCAPMPKIRRVKRYRSMSQKIDVSELQEGMCFSEPVFFDDGENLLLREGEPVSTRELTVLQDWNIPYVVTAG
RVLAEGESVPSSTVEELAEFEELAAEELLDPEDDIVSTGELRTQDILKDICELLPKVCINPHYHEEYVGFIQELNMLFAK
MNAHTTLPARPADMLAKRLSELVRANTLGFVSLVLSYKIEGFRFAKPAVDTAIFSIIVAQHLGFSEKDIFDLVVASLLHD
IGMQHVPADILKKSGRLHFQEQQAVDAHTIYAHSYIVNTLKYPNSVGLSVLQHHEHWNGKGYPQSLSGNKITIGARILAV
TDAFAAMLAPKSYRKPFSGYQAMKSLLADNARRFDPDVIKAMIQSVGIYPIGSLVLLNNSAVARVVKTTATAPLRPCLRI
VIDEHDVTHPDDSGEFIDLAVNKTNYIVGEVSPWSYAKAQ
>Mature_440_residues
MCIRRGINPCAPMPKIRRVKRYRSMSQKIDVSELQEGMCFSEPVFFDDGENLLLREGEPVSTRELTVLQDWNIPYVVTAG
RVLAEGESVPSSTVEELAEFEELAAEELLDPEDDIVSTGELRTQDILKDICELLPKVCINPHYHEEYVGFIQELNMLFAK
MNAHTTLPARPADMLAKRLSELVRANTLGFVSLVLSYKIEGFRFAKPAVDTAIFSIIVAQHLGFSEKDIFDLVVASLLHD
IGMQHVPADILKKSGRLHFQEQQAVDAHTIYAHSYIVNTLKYPNSVGLSVLQHHEHWNGKGYPQSLSGNKITIGARILAV
TDAFAAMLAPKSYRKPFSGYQAMKSLLADNARRFDPDVIKAMIQSVGIYPIGSLVLLNNSAVARVVKTTATAPLRPCLRI
VIDEHDVTHPDDSGEFIDLAVNKTNYIVGEVSPWSYAKAQ

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49019; Mature: 49019

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIRRGINPCAPMPKIRRVKRYRSMSQKIDVSELQEGMCFSEPVFFDDGENLLLREGEPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCEEEECCCCC
STRELTVLQDWNIPYVVTAGRVLAEGESVPSSTVEELAEFEELAAEELLDPEDDIVSTGE
CCCEEEEEECCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
LRTQDILKDICELLPKVCINPHYHEEYVGFIQELNMLFAKMNAHTTLPARPADMLAKRLS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ELVRANTLGFVSLVLSYKIEGFRFAKPAVDTAIFSIIVAQHLGFSEKDIFDLVVASLLHD
HHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IGMQHVPADILKKSGRLHFQEQQAVDAHTIYAHSYIVNTLKYPNSVGLSVLQHHEHWNGK
CCCCCCCHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GYPQSLSGNKITIGARILAVTDAFAAMLAPKSYRKPFSGYQAMKSLLADNARRFDPDVIK
CCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
AMIQSVGIYPIGSLVLLNNSAVARVVKTTATAPLRPCLRIVIDEHDVTHPDDSGEFIDLA
HHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VNKTNYIVGEVSPWSYAKAQ
ECCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MCIRRGINPCAPMPKIRRVKRYRSMSQKIDVSELQEGMCFSEPVFFDDGENLLLREGEPV
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCEEEECCCCC
STRELTVLQDWNIPYVVTAGRVLAEGESVPSSTVEELAEFEELAAEELLDPEDDIVSTGE
CCCEEEEEECCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
LRTQDILKDICELLPKVCINPHYHEEYVGFIQELNMLFAKMNAHTTLPARPADMLAKRLS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
ELVRANTLGFVSLVLSYKIEGFRFAKPAVDTAIFSIIVAQHLGFSEKDIFDLVVASLLHD
HHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IGMQHVPADILKKSGRLHFQEQQAVDAHTIYAHSYIVNTLKYPNSVGLSVLQHHEHWNGK
CCCCCCCHHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
GYPQSLSGNKITIGARILAVTDAFAAMLAPKSYRKPFSGYQAMKSLLADNARRFDPDVIK
CCCCCCCCCEEEECHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH
AMIQSVGIYPIGSLVLLNNSAVARVVKTTATAPLRPCLRIVIDEHDVTHPDDSGEFIDLA
HHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE
VNKTNYIVGEVSPWSYAKAQ
ECCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]