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The map label for this gene is yraN [C]

Identifier: 189026136

GI number: 189026136

Start: 992940

End: 993320

Strand: Direct

Name: yraN [C]

Synonym: TPASS_0913

Alternate gene names: 189026136

Gene position: 992940-993320 (Clockwise)

Preceding gene: 189026135

Following gene: 189026137

Centisome position: 87.14

GC content: 48.82

Gene sequence:

>381_bases
ATGCCAAAGCACAATAAGTTACTCGGTGCATTTGGAGAGGCGTATGCGGCGCGCTGGCTAGCGACGCGCGGATATATTAT
CATCACACGAAACTGGCGCAGAGCAACAGGTGAAATTGATATTATTGCGCAGCAGGATGACACAATAGTATTCGTAGAAG
TGAAGACGCTACGGTGTACCAGTTACGCCGACTTAGCAATTATTGTTGGAAAGCGCAAGCAGAAAAGGATCTGTGAAACC
GCTAAACATTTTCTTGCCAGCGCTCGAGAATACAACCACATGTGTGCGCGCTTTGACGTCATCGTGCTGCGGTCCGATCC
TTTTCGAAGGCAGGATGTGGACATCGTGCACTTGCCACATGCCTTTGAGGATTTGGTATGA

Upstream 100 bases:

>100_bases
GACGAGCACGACGTAACCCATCCTGACGACAGCGGTGAGTTCATTGATTTAGCGGTCAATAAAACGAATTACATTGTAGG
AGAAGTGAGTCCGTGGAGTT

Downstream 100 bases:

>100_bases
AAGGTTCCGTTTTTCCTTCTCGAGGAAGACGAAGTTCCCGCAGGGTGTTTTGCTCTGAAACAATTCACGAACTGGAAAAG
AAGATTCAAGATCAGTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MPKHNKLLGAFGEAYAARWLATRGYIIITRNWRRATGEIDIIAQQDDTIVFVEVKTLRCTSYADLAIIVGKRKQKRICET
AKHFLASAREYNHMCARFDVIVLRSDPFRRQDVDIVHLPHAFEDLV

Sequences:

>Translated_126_residues
MPKHNKLLGAFGEAYAARWLATRGYIIITRNWRRATGEIDIIAQQDDTIVFVEVKTLRCTSYADLAIIVGKRKQKRICET
AKHFLASAREYNHMCARFDVIVLRSDPFRRQDVDIVHLPHAFEDLV
>Mature_125_residues
PKHNKLLGAFGEAYAARWLATRGYIIITRNWRRATGEIDIIAQQDDTIVFVEVKTLRCTSYADLAIIVGKRKQKRICETA
KHFLASAREYNHMCARFDVIVLRSDPFRRQDVDIVHLPHAFEDLV

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y913_TREPA (O83883)

Other databases:

- EMBL:   AE000520
- PIR:   F71268
- RefSeq:   NP_219348.1
- ProteinModelPortal:   O83883
- IntAct:   O83883
- GeneID:   2611665
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0913
- NMPDR:   fig|243276.1.peg.907
- TIGR:   TP_0913
- HOGENOM:   HBG710155
- OMA:   RIATHYL
- ProtClustDB:   PRK12497
- BioCyc:   TPAL243276:TP_0913-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14586; Mature: 14455

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHNKLLGAFGEAYAARWLATRGYIIITRNWRRATGEIDIIAQQDDTIVFVEVKTLRCT
CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEEEC
SYADLAIIVGKRKQKRICETAKHFLASAREYNHMCARFDVIVLRSDPFRRQDVDIVHLPH
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEECCC
AFEDLV
HHHHCC
>Mature Secondary Structure 
PKHNKLLGAFGEAYAARWLATRGYIIITRNWRRATGEIDIIAQQDDTIVFVEVKTLRCT
CCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEEEEC
SYADLAIIVGKRKQKRICETAKHFLASAREYNHMCARFDVIVLRSDPFRRQDVDIVHLPH
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCEEECCC
AFEDLV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876