| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189026053
Identifier: 189026053
GI number: 189026053
Start: 897194
End: 898078
Strand: Direct
Name: 189026053
Synonym: TPASS_0829
Alternate gene names: NA
Gene position: 897194-898078 (Clockwise)
Preceding gene: 189026052
Following gene: 189026054
Centisome position: 78.74
GC content: 45.76
Gene sequence:
>885_bases ATGACCCGGTCATCTACAAAGAAAACAGACAAAAAAGAAAGCACTGTGTCTTTCTATTCAAAAGAGCGCATCGAGTGTCC GGTGTGCACAACCGTCTTCCAAAGAGAAGAAATGCATTCTGGAGGAGGTCGTACCATTGCTGGTGATTTAACCGATGAAC TAAGAAGGACATACGAGACGTCCGCAAAGTATGGAGAGGTATTTCCTCCCATTTACCACGTGGTAGTTTGTCCCACCTGT CTTTACGCAACCTTTCTGCAAGACTTTAGAAATATCGAGCGTGGGATTGTCACTAAACTTTCTTCCACCACATCACAGCG CCGCACATCAGTTGAGCGGCTCATTCCTCAGGTGGATTTTAGCGCACTGCGCACACTCTCCTCTGGGGCGGCGGCTTACT ACTTGGCAATACTGTGCTATGACTTTTTTGATAAAAAGTATTCTCCTACCATTAAACAGGGGATCTGCGCGCTCAGGGCA GCATGGCTTTTTTCTGATCTTGAAAAAAAAGATCCGAACGAGCATTACGATTACATCCGCAATCTTCTATACCAAAAGGC ACTTTTTTTCTATCGCAAGGCAATTGAGTGCGAAAGCACAGGCGAAGAAATTATCGCAGGATTAAAATCCTTTGGACCGG ACACGGATAAAAATTATGGGTACGACGGGGTACTCTATCTTTCGTATCTCCTTGAGTATAAATACGGGACCAAGCGCGAC AGAGCAGTCAGAAGGGAGCGCATGCAGCGGAACAAACAAGGACTTGCAAAGATATTTGGCCTAGGAAAGTCTTCAAAAGA GAAGCCAGGTCCATTGCTGGAACTCGCCCGACAATTGTACGAAAACCTGCTCGCAGAATTACACGAAGACAGTGAAACTA CATGA
Upstream 100 bases:
>100_bases AGGCTATGTTGGCTGCAACAGGAGGCACGCATATACAGGTGTCGCTAACGCATGAGAGAGAAGTCGCCTCAGCCATCGTG ATTATCGAGGGAGAACCGCT
Downstream 100 bases:
>100_bases ATGATGTGCGCAAAATTCTCTTGCGTATTTCGTACGATGGAACACGATTTTGCGGATGGCAAAAACAGGTCTCAGGCTCA CGGGAACGTGCTCCCTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTRSSTKKTDKKESTVSFYSKERIECPVCTTVFQREEMHSGGGRTIAGDLTDELRRTYETSAKYGEVFPPIYHVVVCPTC LYATFLQDFRNIERGIVTKLSSTTSQRRTSVERLIPQVDFSALRTLSSGAAAYYLAILCYDFFDKKYSPTIKQGICALRA AWLFSDLEKKDPNEHYDYIRNLLYQKALFFYRKAIECESTGEEIIAGLKSFGPDTDKNYGYDGVLYLSYLLEYKYGTKRD RAVRRERMQRNKQGLAKIFGLGKSSKEKPGPLLELARQLYENLLAELHEDSETT
Sequences:
>Translated_294_residues MTRSSTKKTDKKESTVSFYSKERIECPVCTTVFQREEMHSGGGRTIAGDLTDELRRTYETSAKYGEVFPPIYHVVVCPTC LYATFLQDFRNIERGIVTKLSSTTSQRRTSVERLIPQVDFSALRTLSSGAAAYYLAILCYDFFDKKYSPTIKQGICALRA AWLFSDLEKKDPNEHYDYIRNLLYQKALFFYRKAIECESTGEEIIAGLKSFGPDTDKNYGYDGVLYLSYLLEYKYGTKRD RAVRRERMQRNKQGLAKIFGLGKSSKEKPGPLLELARQLYENLLAELHEDSETT >Mature_293_residues TRSSTKKTDKKESTVSFYSKERIECPVCTTVFQREEMHSGGGRTIAGDLTDELRRTYETSAKYGEVFPPIYHVVVCPTCL YATFLQDFRNIERGIVTKLSSTTSQRRTSVERLIPQVDFSALRTLSSGAAAYYLAILCYDFFDKKYSPTIKQGICALRAA WLFSDLEKKDPNEHYDYIRNLLYQKALFFYRKAIECESTGEEIIAGLKSFGPDTDKNYGYDGVLYLSYLLEYKYGTKRDR AVRRERMQRNKQGLAKIFGLGKSSKEKPGPLLELARQLYENLLAELHEDSETT
Specific function: Unknown
COG id: COG1655
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018708 [H]
Pfam domain/function: PF09986 DUF2225 [H]
EC number: NA
Molecular weight: Translated: 33780; Mature: 33649
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSSTKKTDKKESTVSFYSKERIECPVCTTVFQREEMHSGGGRTIAGDLTDELRRTYET CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH SAKYGEVFPPIYHVVVCPTCLYATFLQDFRNIERGIVTKLSSTTSQRRTSVERLIPQVDF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SALRTLSSGAAAYYLAILCYDFFDKKYSPTIKQGICALRAAWLFSDLEKKDPNEHYDYIR HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLLYQKALFFYRKAIECESTGEEIIAGLKSFGPDTDKNYGYDGVLYLSYLLEYKYGTKRD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH RAVRRERMQRNKQGLAKIFGLGKSSKEKPGPLLELARQLYENLLAELHEDSETT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRSSTKKTDKKESTVSFYSKERIECPVCTTVFQREEMHSGGGRTIAGDLTDELRRTYET CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH SAKYGEVFPPIYHVVVCPTCLYATFLQDFRNIERGIVTKLSSTTSQRRTSVERLIPQVDF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH SALRTLSSGAAAYYLAILCYDFFDKKYSPTIKQGICALRAAWLFSDLEKKDPNEHYDYIR HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH NLLYQKALFFYRKAIECESTGEEIIAGLKSFGPDTDKNYGYDGVLYLSYLLEYKYGTKRD HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH RAVRRERMQRNKQGLAKIFGLGKSSKEKPGPLLELARQLYENLLAELHEDSETT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]