| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025958
Identifier: 189025958
GI number: 189025958
Start: 799840
End: 800499
Strand: Direct
Name: 189025958
Synonym: TPASS_0733
Alternate gene names: NA
Gene position: 799840-800499 (Clockwise)
Preceding gene: 189025956
Following gene: 189025962
Centisome position: 70.19
GC content: 59.24
Gene sequence:
>660_bases ATGAGCAGAACGTTCCGCGCGTGGCAGTGCGTTGGTGCGCTGTGTGCGCTCTCTCCCCTGCTGCCTGCCTACAGCTCCGA GGGCGTGCGAGAGGTACCCCCCTCCCAGTCTCCGCAGGTGGTGGTGGCGTACGAGCCCATTCGCCCCGGGGATCAGCTGC TCAAAATTGGCATTGTTGCAGGCTGCCAGTTGTACATAGCAGGGGGAAATGGAACCAACGGCTCTTCGAGTTCCGGCACC AACGGTAACGGCAACGGCAAACTGCTCGGGGGCGGGGGGTTTCACCTCGGGTACGAGTATTTTTTTACCAAAAACTTTTC CCTCGGCGGGCAAGTTTCCTTTGAGTGTTACCGCACGACCGGGTCAAACTATTACTTTTCTGTTCCCATCACGGTAAACC CCACGTACACGTTTGCCGTAGGGCGCTGGCGCATACCGCTCTCCCTGGGCGTTGGGCTCAACATTCAGTCCTATCTCAGC AAGAAGGCGCCGGGGCTTATTGCGGAAGCCAGCGCGGGGCTCTACTACCAGTACACCCCGGACTGGTCCATCGGCGGCAT TGTTGCCTACACGCAGCTTGGGGACATTGCAAGCTCCCCCGACAAGTGCAGAGCCGTGGGCCTTGCCACCATTGACTTTG GGGTGCGCTATCACTTTTAG
Upstream 100 bases:
>100_bases TCCACGCGCCCAGTATAGACACGCGCACGCAACAGCGCAAGGACCGAACACGCACGGACACTAGACGGAAGCCCAAGAAA CACCGTATGCTCGGCGTCGT
Downstream 100 bases:
>100_bases CCCCGCCGCCGGGGCAGGTGGCGCGCGCGTCCCTACTGGATAATGGCTTCAAGCGCAATTTCTATCATTTGGGTAAAGGA GCGCTCCCGCTCCTGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSRTFRAWQCVGALCALSPLLPAYSSEGVREVPPSQSPQVVVAYEPIRPGDQLLKIGIVAGCQLYIAGGNGTNGSSSSGT NGNGNGKLLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTTGSNYYFSVPITVNPTYTFAVGRWRIPLSLGVGLNIQSYLS KKAPGLIAEASAGLYYQYTPDWSIGGIVAYTQLGDIASSPDKCRAVGLATIDFGVRYHF
Sequences:
>Translated_219_residues MSRTFRAWQCVGALCALSPLLPAYSSEGVREVPPSQSPQVVVAYEPIRPGDQLLKIGIVAGCQLYIAGGNGTNGSSSSGT NGNGNGKLLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTTGSNYYFSVPITVNPTYTFAVGRWRIPLSLGVGLNIQSYLS KKAPGLIAEASAGLYYQYTPDWSIGGIVAYTQLGDIASSPDKCRAVGLATIDFGVRYHF >Mature_218_residues SRTFRAWQCVGALCALSPLLPAYSSEGVREVPPSQSPQVVVAYEPIRPGDQLLKIGIVAGCQLYIAGGNGTNGSSSSGTN GNGNGKLLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTTGSNYYFSVPITVNPTYTFAVGRWRIPLSLGVGLNIQSYLSK KAPGLIAEASAGLYYQYTPDWSIGGIVAYTQLGDIASSPDKCRAVGLATIDFGVRYHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To T.pallidum TP_0126
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y733_TREPA (O83715)
Other databases:
- EMBL: AE000520 - PIR: B71288 - RefSeq: NP_219170.1 - ProteinModelPortal: O83715 - IntAct: O83715 - GeneID: 2611059 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0733 - NMPDR: fig|243276.1.peg.729 - TIGR: TP_0733 - HOGENOM: HBG731636 - OMA: GTINAAF - ProtClustDB: CLSK382639 - BioCyc: TPAL243276:TP_0733-MONOMER - InterPro: IPR011250 - Gene3D: G3DSA:2.40.160.20
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23328; Mature: 23196
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTFRAWQCVGALCALSPLLPAYSSEGVREVPPSQSPQVVVAYEPIRPGDQLLKIGIVA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEE GCQLYIAGGNGTNGSSSSGTNGNGNGKLLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTT CEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCEEEEEEEEEC GSNYYFSVPITVNPTYTFAVGRWRIPLSLGVGLNIQSYLSKKAPGLIAEASAGLYYQYTP CCCEEEEEEEEECCCEEEEEEEEEEEEEECCCCCHHHHHHHCCCCEEEECCCCEEEEECC DWSIGGIVAYTQLGDIASSPDKCRAVGLATIDFGVRYHF CCCCCCEEEEEECCCCCCCCCHHEEEEEEEEEEEEEECC >Mature Secondary Structure SRTFRAWQCVGALCALSPLLPAYSSEGVREVPPSQSPQVVVAYEPIRPGDQLLKIGIVA CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEE GCQLYIAGGNGTNGSSSSGTNGNGNGKLLGGGGFHLGYEYFFTKNFSLGGQVSFECYRTT CEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCEEEEEEEEEC GSNYYFSVPITVNPTYTFAVGRWRIPLSLGVGLNIQSYLSKKAPGLIAEASAGLYYQYTP CCCEEEEEEEEECCCEEEEEEEEEEEEEECCCCCHHHHHHHCCCCEEEECCCCEEEEECC DWSIGGIVAYTQLGDIASSPDKCRAVGLATIDFGVRYHF CCCCCCEEEEEECCCCCCCCCHHEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876