| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is 189025955
Identifier: 189025955
GI number: 189025955
Start: 797005
End: 798102
Strand: Direct
Name: 189025955
Synonym: TPASS_0730
Alternate gene names: NA
Gene position: 797005-798102 (Clockwise)
Preceding gene: 189025936
Following gene: 189025956
Centisome position: 69.95
GC content: 55.37
Gene sequence:
>1098_bases ATGGCCCGTGCCAGCAGTCCTCTCAGTTCCATGCACTCCCCCCACTCCCTGCCATTCTCGGCGCACTGCGCAGCACGTCT TAGAAAAAAGACCTGCCAGTCCGGTTCGGACGCATCTTTTCAATACAAAGCGCACGAGAAATTCAGCACCCTCCCAAAGG CTCCAGCACGCCGCTTCTTTCCCGTTCAGTATTTCCCCGTTTCCCCTGACAAAAGATGGATTCTCGGATACTTTTCCCCT CCGTCTATGGAAAAGGAAACAGCTGGCATTCTCTGCTCCTATACGCTTTTTCACAGTGCGCTCGTGCTGGCGCTGTCCCT CGCGCACGGGCGTACCCAGGTGCCCCCCAGCTCCACGCTCAGCTTTTTAACGGTCATTGTACTCTGGCACTGTCTGCTCT TCTTTTTTCTTGTCGCGTATAGCAGAGAACCTGCAGATACCACCGTGCCGTTTAAACCGCTGCCTGAACAGACAGCGCCT ATTTGTGCCGCCGCATCTTCTGACTGTAAGGAGAACCGCACCGCGCTGAAAACGCTGAACACTGCAACGCACATCACGCT TATCCGTGCCAGTGCTATTCCTATCGTTGGCTTTCTGCTTAAATTCCACGCACTGGCGGGGCTTTCTTACTTCCTCGTTG CAGGACTGAGCGTTTTGTTCCTCACCGATTTTATCGATGGCAAAATTGCCCGCGCAAGACGAGAAACGTCCCGCGTGGGA GAAACGCTCGACGCAGCAAGCGACTACGCGCTTATCGGGCTCATCTCAGCGCTTTACTACCAAAGCGGTGTGGTGCCCCT GTGGTTCTTTGTGCTTATCATCACCCGGCTTTCGTTACAAACGGTTATTGCCTGTGTGTACGCGCTTTTTGGCCACCCGA TGACCGGTTCCACCGCGGGGGGCAAAGCGACGGTGGCCGTGACTATGCTCCTGTACACGCTCGAACTTGCCCGTCTCCTG CTGCCGAACCTTGCGCGATCAAACAGCGGCGCGCGCTTTTTTACCGGGGCAGAAATCCTTGCAGGATTCGTCATTTTCAC CGGGATAGTGGAAAAACTGTATCTTGGCGTTCAGCATCGCCCAGGACGCTCCCCGTAG
Upstream 100 bases:
>100_bases ATGCAACGACTGAGCAAAAGAACACGGTGCTGCCGCACACGACGTACCGACTGAAATAGTCTCCTGCGCAGCAGGCGCAG ACTCCGCCACACCGATACCA
Downstream 100 bases:
>100_bases GAGAGACGATACTTGCGCCGTGCCTTGCAACACACAAAACCTGTACCAACCGGGGCAAAAGGAGTGCACGCCCATGGATG AAGGAAGAGAAACTGTCCAG
Product: hypothetical protein
Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MARASSPLSSMHSPHSLPFSAHCAARLRKKTCQSGSDASFQYKAHEKFSTLPKAPARRFFPVQYFPVSPDKRWILGYFSP PSMEKETAGILCSYTLFHSALVLALSLAHGRTQVPPSSTLSFLTVIVLWHCLLFFFLVAYSREPADTTVPFKPLPEQTAP ICAAASSDCKENRTALKTLNTATHITLIRASAIPIVGFLLKFHALAGLSYFLVAGLSVLFLTDFIDGKIARARRETSRVG ETLDAASDYALIGLISALYYQSGVVPLWFFVLIITRLSLQTVIACVYALFGHPMTGSTAGGKATVAVTMLLYTLELARLL LPNLARSNSGARFFTGAEILAGFVIFTGIVEKLYLGVQHRPGRSP
Sequences:
>Translated_365_residues MARASSPLSSMHSPHSLPFSAHCAARLRKKTCQSGSDASFQYKAHEKFSTLPKAPARRFFPVQYFPVSPDKRWILGYFSP PSMEKETAGILCSYTLFHSALVLALSLAHGRTQVPPSSTLSFLTVIVLWHCLLFFFLVAYSREPADTTVPFKPLPEQTAP ICAAASSDCKENRTALKTLNTATHITLIRASAIPIVGFLLKFHALAGLSYFLVAGLSVLFLTDFIDGKIARARRETSRVG ETLDAASDYALIGLISALYYQSGVVPLWFFVLIITRLSLQTVIACVYALFGHPMTGSTAGGKATVAVTMLLYTLELARLL LPNLARSNSGARFFTGAEILAGFVIFTGIVEKLYLGVQHRPGRSP >Mature_364_residues ARASSPLSSMHSPHSLPFSAHCAARLRKKTCQSGSDASFQYKAHEKFSTLPKAPARRFFPVQYFPVSPDKRWILGYFSPP SMEKETAGILCSYTLFHSALVLALSLAHGRTQVPPSSTLSFLTVIVLWHCLLFFFLVAYSREPADTTVPFKPLPEQTAPI CAAASSDCKENRTALKTLNTATHITLIRASAIPIVGFLLKFHALAGLSYFLVAGLSVLFLTDFIDGKIARARRETSRVGE TLDAASDYALIGLISALYYQSGVVPLWFFVLIITRLSLQTVIACVYALFGHPMTGSTAGGKATVAVTMLLYTLELARLLL PNLARSNSGARFFTGAEILAGFVIFTGIVEKLYLGVQHRPGRSP
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.5
Molecular weight: Translated: 39799; Mature: 39668
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARASSPLSSMHSPHSLPFSAHCAARLRKKTCQSGSDASFQYKAHEKFSTLPKAPARRFF CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCHHCC PVQYFPVSPDKRWILGYFSPPSMEKETAGILCSYTLFHSALVLALSLAHGRTQVPPSSTL CEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SFLTVIVLWHCLLFFFLVAYSREPADTTVPFKPLPEQTAPICAAASSDCKENRTALKTLN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH TATHITLIRASAIPIVGFLLKFHALAGLSYFLVAGLSVLFLTDFIDGKIARARRETSRVG HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ETLDAASDYALIGLISALYYQSGVVPLWFFVLIITRLSLQTVIACVYALFGHPMTGSTAG HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GKATVAVTMLLYTLELARLLLPNLARSNSGARFFTGAEILAGFVIFTGIVEKLYLGVQHR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC PGRSP CCCCC >Mature Secondary Structure ARASSPLSSMHSPHSLPFSAHCAARLRKKTCQSGSDASFQYKAHEKFSTLPKAPARRFF CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCHHCC PVQYFPVSPDKRWILGYFSPPSMEKETAGILCSYTLFHSALVLALSLAHGRTQVPPSSTL CEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SFLTVIVLWHCLLFFFLVAYSREPADTTVPFKPLPEQTAPICAAASSDCKENRTALKTLN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH TATHITLIRASAIPIVGFLLKFHALAGLSYFLVAGLSVLFLTDFIDGKIARARRETSRVG HHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ETLDAASDYALIGLISALYYQSGVVPLWFFVLIITRLSLQTVIACVYALFGHPMTGSTAG HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GKATVAVTMLLYTLELARLLLPNLARSNSGARFFTGAEILAGFVIFTGIVEKLYLGVQHR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCC PGRSP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate
Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA