| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025936
Identifier: 189025936
GI number: 189025936
Start: 780140
End: 780712
Strand: Direct
Name: 189025936
Synonym: TPASS_0711
Alternate gene names: NA
Gene position: 780140-780712 (Clockwise)
Preceding gene: 189025935
Following gene: 189025955
Centisome position: 68.47
GC content: 53.05
Gene sequence:
>573_bases ATGCTGGTGATGTCGATTACGTTCTCTTTCGTGGCCGTTGCTCTGCTTGTGTACTTCTACGTGAAGGTGCGTACGAGTTT TTCTCCTGACGCCTATGCGAAAACGATGCAACAGGAAGTGATAAAGATGATTCGAGATATACGGTATGAAGCGGACATTG CCGTGCAAATGCTCGAGAAGAAGATAGGAGAGTGTAACCAGGTCGTCCGCACGATCGACAGAAAACTCACTCTTCTTAAC GAGGAAATACTTAAGGAGCACACGGCTCGCACCCTGTTCAGGGCATCGGGTGCGGGGCAGGAGACTCGGGAGGAGGTTTG CGCGCGACCTGAGCACCGGAGCGCTCCTTCACGCGCAGGATCGAGTGCAGCGAAACCCACCCCTACCAAGCGTGGCACCA TTGAGGTTTATAACGAGAAAATCATTCGGGACAACGGGCTGAGAGCTGAGTCCCCTTTGCTTAAAGACGCCATCATCGCC CTATCTGAGAAGGGACTTGCCCCTGAGTTCATTGCGGAAAAGACCGGCAAGCCACTGGGGGAGGTCCAACTTCTCATCAA TCTTAGTCGGTAG
Upstream 100 bases:
>100_bases TGGCCAATACACGGGCGAACAGGATGAAGATTATAAAAGAGCCCCTTCAGGTTATGCGTACTAAGTTTTCCTTATACGCA GCGAAAATGAGGAATACGCT
Downstream 100 bases:
>100_bases GGAAAGGGGGAGCCTTATTCCCATTCCCTTCCAAATATCCTGCGAATAAAACCTGAAAGCCCGCCTGTCTCGGCGATCTC TGTTTTTTCCAGCTTTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLVMSITFSFVAVALLVYFYVKVRTSFSPDAYAKTMQQEVIKMIRDIRYEADIAVQMLEKKIGECNQVVRTIDRKLTLLN EEILKEHTARTLFRASGAGQETREEVCARPEHRSAPSRAGSSAAKPTPTKRGTIEVYNEKIIRDNGLRAESPLLKDAIIA LSEKGLAPEFIAEKTGKPLGEVQLLINLSR
Sequences:
>Translated_190_residues MLVMSITFSFVAVALLVYFYVKVRTSFSPDAYAKTMQQEVIKMIRDIRYEADIAVQMLEKKIGECNQVVRTIDRKLTLLN EEILKEHTARTLFRASGAGQETREEVCARPEHRSAPSRAGSSAAKPTPTKRGTIEVYNEKIIRDNGLRAESPLLKDAIIA LSEKGLAPEFIAEKTGKPLGEVQLLINLSR >Mature_190_residues MLVMSITFSFVAVALLVYFYVKVRTSFSPDAYAKTMQQEVIKMIRDIRYEADIAVQMLEKKIGECNQVVRTIDRKLTLLN EEILKEHTARTLFRASGAGQETREEVCARPEHRSAPSRAGSSAAKPTPTKRGTIEVYNEKIIRDNGLRAESPLLKDAIIA LSEKGLAPEFIAEKTGKPLGEVQLLINLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BB0265
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y711_TREPA (O83709)
Other databases:
- EMBL: AE000520 - PIR: C71290 - RefSeq: NP_219148.1 - ProteinModelPortal: O83709 - IntAct: O83709 - MINT: MINT-6480097 - GeneID: 2610975 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0711 - NMPDR: fig|243276.1.peg.707 - TIGR: TP_0711 - HOGENOM: HBG251049 - OMA: KENPPID - ProtClustDB: CLSK218826 - BioCyc: TPAL243276:TP_0711-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21267; Mature: 21267
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2157d33c)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVMSITFSFVAVALLVYFYVKVRTSFSPDAYAKTMQQEVIKMIRDIRYEADIAVQMLEK CEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGECNQVVRTIDRKLTLLNEEILKEHTARTLFRASGAGQETREEVCARPEHRSAPSRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC SSAAKPTPTKRGTIEVYNEKIIRDNGLRAESPLLKDAIIALSEKGLAPEFIAEKTGKPLG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHH EVQLLINLSR HEEHEEEECH >Mature Secondary Structure MLVMSITFSFVAVALLVYFYVKVRTSFSPDAYAKTMQQEVIKMIRDIRYEADIAVQMLEK CEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIGECNQVVRTIDRKLTLLNEEILKEHTARTLFRASGAGQETREEVCARPEHRSAPSRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC SSAAKPTPTKRGTIEVYNEKIIRDNGLRAESPLLKDAIIALSEKGLAPEFIAEKTGKPLG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHH EVQLLINLSR HEEHEEEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876