Click here to switch to the map view.

The map label for this gene is motB

Identifier: 189025949

GI number: 189025949

Start: 791622

End: 792338

Strand: Reverse

Name: motB

Synonym: TPASS_0724

Alternate gene names: 189025949

Gene position: 792338-791622 (Counterclockwise)

Preceding gene: 189025950

Following gene: 189025948

Centisome position: 69.54

GC content: 51.88

Gene sequence:

>717_bases
ATGGCAAGGAAGAGGCGTGCTCCGCGCGGGGCGGCACAAGGGTGGCTAACGACATACTCAGATATGGTCACGCTTATGCT
CTGTTTTTTTGTCATGCTGTTTAATCCAACTGAAGTTGATATCACGGTGTTGCAGAGTATTGCTGCATCGATTGTAGGTG
ATCCTACCGGTGGAGGGGTTTCTGCCTCCTCAGGGAGGCTCGCTGACTTGGGAAACACCGTTAACACGCTGCCTTCACTG
GAAAAGGGACAGAAGCTGGCGACTGCGCTGAAGAAGGCGGTTTCGCTTTTCGCTCCTGAGATTAAAAGCAATAAGATTGC
GGTGACCAGTGATGAGCGCGGTTTAGTTATTTCGCTCACTTCGGATTCGTTTTTTTATCCGGGGTCTTCCGATCTGAATG
TGGAGGAATCTCGGGAGGCGTTGTTGCGTGTTGCGCAGTTTTTGTCTGATCATGCGCTCGCCGGTCGACGGTTTCGCATT
GAGGGACACACCGACTCAGTTGAGGTGCCCGAAGATGGGAGTACAGACAATTGGGAACTTTCTACCCGTCGGGCGGTGCG
CGTGTTGCATTATCTTACTGATTTTGGTGCACAGGAAAATCGCTTTTCCCTTGCAGGGTACGCAGACACACGCGCAAAAT
TTTCAAACGAAAGCCCTGAAGGGAGGGCGTACAACCGGCGGGTTGATATTGTCATCCTGGACGAGGGTCACTTTTGA

Upstream 100 bases:

>100_bases
CAGGGGATCATCCACGTGTTCTTGCGCAGCGATTGCTGACGTACTTGAGTCCAAAGATGCGCAAGGAACTGGAAATGGAA
CTGATTAAGGATTAATGCTC

Downstream 100 bases:

>100_bases
TGGTACACTTCCGCTTCCCCTTTCCCGGAGGTGAGTTTCCGGTATCTGCACAGCCTGAGTTTGAGCTGGTGGCGCGTCTG
CACGCCGCTGTAGTACGTGA

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MARKRRAPRGAAQGWLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTGGGVSASSGRLADLGNTVNTLPSL
EKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTSDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRI
EGHTDSVEVPEDGSTDNWELSTRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEGHF

Sequences:

>Translated_238_residues
MARKRRAPRGAAQGWLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTGGGVSASSGRLADLGNTVNTLPSL
EKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTSDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRI
EGHTDSVEVPEDGSTDNWELSTRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEGHF
>Mature_237_residues
ARKRRAPRGAAQGWLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTGGGVSASSGRLADLGNTVNTLPSLE
KGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLTSDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRIE
GHTDSVEVPEDGSTDNWELSTRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEGHF

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MOTB_TREPA (O07887)

Other databases:

- EMBL:   U28219
- EMBL:   AE000520
- PIR:   H71291
- RefSeq:   NP_219161.1
- ProteinModelPortal:   O07887
- SMR:   O07887
- IntAct:   O07887
- GeneID:   2611027
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0724
- NMPDR:   fig|243276.1.peg.720
- TIGR:   TP_0724
- HOGENOM:   HBG740731
- OMA:   ISPGKFQ
- ProtClustDB:   PRK06667
- BioCyc:   TPAL243276:TP_0724-MONOMER
- GO:   GO:0006935
- InterPro:   IPR006665
- Gene3D:   G3DSA:3.30.1330.60

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 26051; Mature: 25919

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f4009c0)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKRRAPRGAAQGWLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTGGGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
SASSGRLADLGNTVNTLPSLEKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLT
CCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEC
SDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRIEGHTDSVEVPEDGSTDNWEL
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCH
STRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEGHF
HHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCH
>Mature Secondary Structure 
ARKRRAPRGAAQGWLTTYSDMVTLMLCFFVMLFNPTEVDITVLQSIAASIVGDPTGGGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
SASSGRLADLGNTVNTLPSLEKGQKLATALKKAVSLFAPEIKSNKIAVTSDERGLVISLT
CCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEC
SDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRIEGHTDSVEVPEDGSTDNWEL
CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCCH
STRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYNRRVDIVILDEGHF
HHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876