| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025928
Identifier: 189025928
GI number: 189025928
Start: 769338
End: 770018
Strand: Reverse
Name: 189025928
Synonym: TPASS_0703
Alternate gene names: NA
Gene position: 770018-769338 (Counterclockwise)
Preceding gene: 189025929
Following gene: 189025927
Centisome position: 67.58
GC content: 57.71
Gene sequence:
>681_bases ATGGGTGCAGAGAGAGTAGGACGCGCACCGGGGGTGAACGCTAAAAGGGCAGTGCAGACGCAGGGCGTGCAGTCACCGTC GGTGAAAAGAAGTGTTCGTTGGGTGCGTGGTCTGTGCGAAGTACTCTTGTTCTCTGGTGTCTTTGTCAGCGCGGTGTCCT TCCTGCTTCATTCGGCTGCGGTGCCGCCGCCGGAGCGTCAGGTGGTTCCTGCACATTTCGAGCGTATCGCTATGCAGTTC CCGCGTCAGGTATCCCAAGGTGCGTGTGCGATGGCCACTTTTTCTTTAGTGGCATTGCAAGAAAAGGACAAGGCGCATAC TGAGGTACATCTGGTGCTGCGTACCCCTGCGGGTAAAGAAGCAAAGACGGTGCGCGCTTTTGCGCTTCCCCCAAAGGGTA TTGCTCAGTTAGGGACGGACGCGGCAACCGCTGGCGTCTCGCGTGCAGGTTCTCAGGATGTGACGCACGTTGCCTTGCTG GGGATATCGATTTTCTGGGAACCGGGGGATTGGATGCTTGAAGCGCAGGTGCGTGTGCCGGGAGGGAAGCCATATGTGCG GCGTGCGCCGCTGCGCATTGAGAAAAAGGAATTTCCCCGTGAGGAATTACGCTTAGATCGCAAGAATACCGCCATTGCGC AGGACAAGAGTGAGCGCAAAAAGGTGCAGCGTGACGCCTGA
Upstream 100 bases:
>100_bases TGGGGGATGTAGTTGACGCGGTTTTTCAAGTGACGCGTAACACGTTTCAGGGAACGTGCACACCGCAGCTGGTCATTCAA GATTTGTGGAGGAGTGAGTG
Downstream 100 bases:
>100_bases AGGCGCTCTGGACCGTGACCTCCCCTCAGACTCGGGCCTTTTTAGGGCCGTTTCGACAACCGGTGGAATCTCGACGGTGT ACGTCGGTGTTTGGGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MGAERVGRAPGVNAKRAVQTQGVQSPSVKRSVRWVRGLCEVLLFSGVFVSAVSFLLHSAAVPPPERQVVPAHFERIAMQF PRQVSQGACAMATFSLVALQEKDKAHTEVHLVLRTPAGKEAKTVRAFALPPKGIAQLGTDAATAGVSRAGSQDVTHVALL GISIFWEPGDWMLEAQVRVPGGKPYVRRAPLRIEKKEFPREELRLDRKNTAIAQDKSERKKVQRDA
Sequences:
>Translated_226_residues MGAERVGRAPGVNAKRAVQTQGVQSPSVKRSVRWVRGLCEVLLFSGVFVSAVSFLLHSAAVPPPERQVVPAHFERIAMQF PRQVSQGACAMATFSLVALQEKDKAHTEVHLVLRTPAGKEAKTVRAFALPPKGIAQLGTDAATAGVSRAGSQDVTHVALL GISIFWEPGDWMLEAQVRVPGGKPYVRRAPLRIEKKEFPREELRLDRKNTAIAQDKSERKKVQRDA >Mature_225_residues GAERVGRAPGVNAKRAVQTQGVQSPSVKRSVRWVRGLCEVLLFSGVFVSAVSFLLHSAAVPPPERQVVPAHFERIAMQFP RQVSQGACAMATFSLVALQEKDKAHTEVHLVLRTPAGKEAKTVRAFALPPKGIAQLGTDAATAGVSRAGSQDVTHVALLG ISIFWEPGDWMLEAQVRVPGGKPYVRRAPLRIEKKEFPREELRLDRKNTAIAQDKSERKKVQRDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y703_TREPA (O83701)
Other databases:
- EMBL: AE000520 - PIR: C71289 - RefSeq: NP_219140.1 - ProteinModelPortal: O83701 - GeneID: 2610943 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0703 - NMPDR: fig|243276.1.peg.699 - TIGR: TP_0703 - HOGENOM: HBG251044 - ProtClustDB: CLSK2300276 - BioCyc: TPAL243276:TP_0703-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24716; Mature: 24585
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAERVGRAPGVNAKRAVQTQGVQSPSVKRSVRWVRGLCEVLLFSGVFVSAVSFLLHSAA CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPPPERQVVPAHFERIAMQFPRQVSQGACAMATFSLVALQEKDKAHTEVHLVLRTPAGKE CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC AKTVRAFALPPKGIAQLGTDAATAGVSRAGSQDVTHVALLGISIFWEPGDWMLEAQVRVP CCEEEEEECCCHHHHHHCCHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCEEEEEEEECC GGKPYVRRAPLRIEKKEFPREELRLDRKNTAIAQDKSERKKVQRDA CCCCCCCCCCCEECHHHCCHHHHHCCCCHHHHHCCHHHHHHHHCCC >Mature Secondary Structure GAERVGRAPGVNAKRAVQTQGVQSPSVKRSVRWVRGLCEVLLFSGVFVSAVSFLLHSAA CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPPPERQVVPAHFERIAMQFPRQVSQGACAMATFSLVALQEKDKAHTEVHLVLRTPAGKE CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC AKTVRAFALPPKGIAQLGTDAATAGVSRAGSQDVTHVALLGISIFWEPGDWMLEAQVRVP CCEEEEEECCCHHHHHHCCHHHHHHHHCCCCCCHHHHHEEEEEEEECCCCEEEEEEEECC GGKPYVRRAPLRIEKKEFPREELRLDRKNTAIAQDKSERKKVQRDA CCCCCCCCCCCEECHHHCCHHHHHCCCCHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876