| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025896
Identifier: 189025896
GI number: 189025896
Start: 736914
End: 737948
Strand: Reverse
Name: 189025896
Synonym: TPASS_0671
Alternate gene names: NA
Gene position: 737948-736914 (Counterclockwise)
Preceding gene: 189025897
Following gene: 189025895
Centisome position: 64.76
GC content: 49.95
Gene sequence:
>1035_bases ATGTCACATATTACATCGCGAAGGAGCTCTCGTATGAAAGCGTATTCTTATGCAGTAGAGGATCGCTCGCTTCTCACTCC TTTTCTGTATCGCTTCTGTGTAGATCCGCTGTTACGCGTGGTGCCGTATCGAGTTCCGGCGAATCTCATTACGCTGTGCG CAAACGCCTGTATGCTGCTTGCATTTACCCATGCGTACTGCGGCTCGGTGGGGGGTACCTACGCGTATTGGTTTCTAGTT CCTGTGCTGTGTATTGTGTACCTGGTCGGAGATTGTCTTGATGGGCGCCAAGCTCGGAGAACGGGAACTGGTAGCCCCTT GGGAGAATATTTTGACCATTGTTTGGACACCTCTGTTGTAGGACTGCTGGCAGGAATTTTCGTGCTCGCGTTTCGTATAC GCGAGCCATTTCTTTTGACGTGTATCTTTTTTGTTCCCGCGTTTGTGCAGATTTCAACCCTGTGGGAAAAGCTGCACCGC GGGGTGATGGTGTTTGCGCGCATTGGGTCAAACGAGATGGTAGTGCTGACCACACTCGGCGCATACGCTGGGTCGTTCGA AACACTGCGTGCGCTGTTCCTCACGCCGTTGTTTTTTTCCTGTACTCCTGCACAGGTATGTGTATCAGTGCTCTCAACGG GAGTGTGTATTTTTTCGTGTGCGGTGTTTTGGCGTATGCGAGTGTTTTCATGCGCACTTTTTTTGCATTTATCCCTTTTC TTCTTTCTCTGTGTATTTTCAAGTACGTATTTCCCCACGCAGATTGGATATATAACGGCACTGTGCACGTTATATCACAT GCGATATGCAGAGCGCCTTCTGCGCGTCATTGTACAGGGGGAGGGAACTGCCCGTGTTGAGGTGTTGGTGCCACTTTTGT GCGGTGTGTTGTTTCTTTTTCCTCAGACAAGCTTTTGGGTGCAGCGGGCGCAGTGTAGTATTTTGGCACTTGAGGTGGGG GTGCACTTTGTACGATTTGTGTATGCTCATCGCTGTTATTGGCATTGGCTGAATCCTCTTCCAACACAGGAGTAG
Upstream 100 bases:
>100_bases GCGCCGGGTCTCTCGTGCCTTTCTTGCAGAGTTTTTGCGCACAGAGATAAAACACTACCGGCGTCCCTAGGTTGTTGTCC GCTCTCTGCGCGCGGGGAAA
Downstream 100 bases:
>100_bases CGTGGTGCATGTGACGCTTTTGTACGGAGGCCGTTCTGCAGAGCACGATGTTTCTGTACGTTCTGCACGTTTTGTGGCGC GCACGTTGTGCTTACAACAC
Product: sn-1,2-diacylglycerol cholinephosphotransferase
Products: CMP; phosphatidylcholine
Alternate protein names: CDP-Alcohol Phosphatidyltransferase Family Protein
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSHITSRRSSRMKAYSYAVEDRSLLTPFLYRFCVDPLLRVVPYRVPANLITLCANACMLLAFTHAYCGSVGGTYAYWFLV PVLCIVYLVGDCLDGRQARRTGTGSPLGEYFDHCLDTSVVGLLAGIFVLAFRIREPFLLTCIFFVPAFVQISTLWEKLHR GVMVFARIGSNEMVVLTTLGAYAGSFETLRALFLTPLFFSCTPAQVCVSVLSTGVCIFSCAVFWRMRVFSCALFLHLSLF FFLCVFSSTYFPTQIGYITALCTLYHMRYAERLLRVIVQGEGTARVEVLVPLLCGVLFLFPQTSFWVQRAQCSILALEVG VHFVRFVYAHRCYWHWLNPLPTQE
Sequences:
>Translated_344_residues MSHITSRRSSRMKAYSYAVEDRSLLTPFLYRFCVDPLLRVVPYRVPANLITLCANACMLLAFTHAYCGSVGGTYAYWFLV PVLCIVYLVGDCLDGRQARRTGTGSPLGEYFDHCLDTSVVGLLAGIFVLAFRIREPFLLTCIFFVPAFVQISTLWEKLHR GVMVFARIGSNEMVVLTTLGAYAGSFETLRALFLTPLFFSCTPAQVCVSVLSTGVCIFSCAVFWRMRVFSCALFLHLSLF FFLCVFSSTYFPTQIGYITALCTLYHMRYAERLLRVIVQGEGTARVEVLVPLLCGVLFLFPQTSFWVQRAQCSILALEVG VHFVRFVYAHRCYWHWLNPLPTQE >Mature_343_residues SHITSRRSSRMKAYSYAVEDRSLLTPFLYRFCVDPLLRVVPYRVPANLITLCANACMLLAFTHAYCGSVGGTYAYWFLVP VLCIVYLVGDCLDGRQARRTGTGSPLGEYFDHCLDTSVVGLLAGIFVLAFRIREPFLLTCIFFVPAFVQISTLWEKLHRG VMVFARIGSNEMVVLTTLGAYAGSFETLRALFLTPLFFSCTPAQVCVSVLSTGVCIFSCAVFWRMRVFSCALFLHLSLFF FLCVFSSTYFPTQIGYITALCTLYHMRYAERLLRVIVQGEGTARVEVLVPLLCGVLFLFPQTSFWVQRAQCSILALEVGV HFVRFVYAHRCYWHWLNPLPTQE
Specific function: Unknown
COG id: COG5050
COG function: function code I; sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI5174415, Length=180, Percent_Identity=30, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI56118223, Length=180, Percent_Identity=30, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.2
Molecular weight: Translated: 38970; Mature: 38838
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHITSRRSSRMKAYSYAVEDRSLLTPFLYRFCVDPLLRVVPYRVPANLITLCANACMLL CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AFTHAYCGSVGGTYAYWFLVPVLCIVYLVGDCLDGRQARRTGTGSPLGEYFDHCLDTSVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHH GLLAGIFVLAFRIREPFLLTCIFFVPAFVQISTLWEKLHRGVMVFARIGSNEMVVLTTLG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHH AYAGSFETLRALFLTPLFFSCTPAQVCVSVLSTGVCIFSCAVFWRMRVFSCALFLHLSLF HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLCVFSSTYFPTQIGYITALCTLYHMRYAERLLRVIVQGEGTARVEVLVPLLCGVLFLF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PQTSFWVQRAQCSILALEVGVHFVRFVYAHRCYWHWLNPLPTQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHITSRRSSRMKAYSYAVEDRSLLTPFLYRFCVDPLLRVVPYRVPANLITLCANACMLL CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AFTHAYCGSVGGTYAYWFLVPVLCIVYLVGDCLDGRQARRTGTGSPLGEYFDHCLDTSVV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHH GLLAGIFVLAFRIREPFLLTCIFFVPAFVQISTLWEKLHRGVMVFARIGSNEMVVLTTLG HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHH AYAGSFETLRALFLTPLFFSCTPAQVCVSVLSTGVCIFSCAVFWRMRVFSCALFLHLSLF HHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLCVFSSTYFPTQIGYITALCTLYHMRYAERLLRVIVQGEGTARVEVLVPLLCGVLFLF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH PQTSFWVQRAQCSILALEVGVHFVRFVYAHRCYWHWLNPLPTQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CDPcholine; 1,2-diacylglycerol
Specific reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA