| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025811
Identifier: 189025811
GI number: 189025811
Start: 635296
End: 636705
Strand: Direct
Name: 189025811
Synonym: TPASS_0584
Alternate gene names: NA
Gene position: 635296-636705 (Clockwise)
Preceding gene: 189025809
Following gene: 189025812
Centisome position: 55.75
GC content: 48.65
Gene sequence:
>1410_bases ATGGAAGAACGCAAGAACTATATGGATCGGCTTGCCGAAGCACTTACGCGGCGCAAGGTGCAGCTCGATCGGGACATCCT ACCAAAGGCGCTGGAGCAGTACCGTGTCCAGGTCACAGCGGTAAAGGCAATTCGCAGTAATTTGCTGCAAAAAGGTTTCT TGCACGATGACGCGTACAAGTACGACAGCAAGATGACTGAGATTGAGTTGCCAGAAACTTCCCCCTACGGGGAAAATGAG AAGCCGATGGTCATTGGTTCTCGCCTTTCGCACTATCAGACTATGCTCGGTTTTTTGGACAACTACTACCGGTTCGATTC GGAGTTTCTAATCCCGAAACGTATTGCAAAGCTCGTTGCGCTCAACGGTACGTTCATGTGGAAAGATTTTACTGCTACCA CCAAAGACGCGAACACACGTGGGCTATTTGACATAGTGCAATCTTTCTATGGCGCTGCTGATCCTATTTCGATAGGACTG GTGAGGGATTCGTTGCAGTACCTAGTAAAAGCCCATGAGGTAATCAGCACAGCACTTAAGTCCCTTTCGGTGTTTCATCG CGAGCGCTACAAATTGCTTATTCGCCAGCATGCTCTGGATGGCTTGGACGAGACAACGGTGGACGTCAACAACCCAGAGG TTGCGCTTGACGCGATGAAAAAGAACTTTTCAGAAAATGCAAAAGGCCATCCGTTCTACAGCGAGTTGGCAACCGTGGTT TTGAGAGAAGACTTCTCTGCCAACGCAGAAAAGCTGCGGGCTGCAATCCTCCGCGAGTTTGAAGAATCTTCTGCACCCAA AAGATGCCGCGGTGCTATGCGCAATCCACACGCCGTACTACTTTCTGGTTTCAGATCGCTTGGAGCTACTTCTAGCCACT TTCATACTGCTCTGGAAAAGATTCGCTTCAATGAGGAGCTCGTGACTCAGTCTGAGGCGACCTTCTTTTCAAAGGTAGTG TTAGCCTTTCTCAAAGCTTTCAACATTCAGACGCGTTCAAAGGACGTTGAAATTGTCGTCGTCGACCCGGCAACACAGAT ACAGAAAAAGGAATGCGTAAACGTTGAGCTCTTTCAAAAAGAGCTGGCCCGGTGTGTCAAACTGTATCGGGGTTTTGTGT CTCCAGACACTCCGATTCATGAAAAGTTAATGGCGCTCAAGGACGAGCAGCTCTTCGAGCTCCTTTTTAAACACGTAGCA GAGGCGCATACGCTGGTTAAACAGCTTGCAGGTCTTGATGAGTACTACAAGACAGTGAGGTCTGATGTGCGCGCGAAAAT TAAAGGGGTCAAGATTGAAGTTACAACTATCACCACTTCTGTAACCAAGGCAAATAAGTGCCGCGCAGAATATGCCTCGC AACTAGAGGAGCAAAAACATATGAAGCGTTTAGGGGTAGCCCGTGCGTAG
Upstream 100 bases:
>100_bases TGTGATAGGATGCCCCCAGTTTTTTTGATTTCTTACATCCGGCTCGCAGACGGATGGGTACCATCTTTTAGAAGAGCACT CGGCCGGTGCGGTAGGGGCT
Downstream 100 bases:
>100_bases AATGCGGCTCTCGCGCCGCGGCATTCTCACGGTAGTAGGTACCCTTCTTCTCCTACCTCTCTTTCCTTCCGAAAAAAAAA AGACTCACGCGCCGCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA
Sequences:
>Translated_469_residues MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA >Mature_469_residues MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYKYDSKMTEIELPETSPYGENE KPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVALNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGL VRDSLQYLVKAHEVISTALKSLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEKIRFNEELVTQSEATFFSKVV LAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQKELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVA EAHTLVKQLAGLDEYYKTVRSDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53544; Mature: 53544
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YDSKMTEIELPETSPYGENEKPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVA HCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGLVRDSLQYLVKAHEVISTALK CCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEK HHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH IRFNEELVTQSEATFFSKVVLAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQK HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHH ELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVAEAHTLVKQLAGLDEYYKTVR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA HHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEERKNYMDRLAEALTRRKVQLDRDILPKALEQYRVQVTAVKAIRSNLLQKGFLHDDAYK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH YDSKMTEIELPETSPYGENEKPMVIGSRLSHYQTMLGFLDNYYRFDSEFLIPKRIAKLVA HCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LNGTFMWKDFTATTKDANTRGLFDIVQSFYGAADPISIGLVRDSLQYLVKAHEVISTALK CCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLSVFHRERYKLLIRQHALDGLDETTVDVNNPEVALDAMKKNFSENAKGHPFYSELATVV HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH LREDFSANAEKLRAAILREFEESSAPKRCRGAMRNPHAVLLSGFRSLGATSSHFHTALEK HHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH IRFNEELVTQSEATFFSKVVLAFLKAFNIQTRSKDVEIVVVDPATQIQKKECVNVELFQK HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHH ELARCVKLYRGFVSPDTPIHEKLMALKDEQLFELLFKHVAEAHTLVKQLAGLDEYYKTVR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH SDVRAKIKGVKIEVTTITTSVTKANKCRAEYASQLEEQKHMKRLGVARA HHHHHHHCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]