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The map label for this gene is mreD

Identifier: 189025729

GI number: 189025729

Start: 535220

End: 535726

Strand: Direct

Name: mreD

Synonym: TPASS_0499

Alternate gene names: NA

Gene position: 535220-535726 (Clockwise)

Preceding gene: 189025728

Following gene: 189025730

Centisome position: 46.97

GC content: 43.2

Gene sequence:

>507_bases
ATGATACGGCTCATCGCCTGGTCTGTAGGTACCTCTTTTCTTTTTAGCATTGTAGAGATGGCAGTGTTCGTACACGTTTC
GTACTTATCCATTATGCCAGATCTCGTCTTGCTCGTAGTACTGTTCACGAGCATTCACAATGGCGTGGTGGCAGGGATAT
GGACTGGATTTATTGCAGGAATTATTTTTGACTTCCTTTCTATCTCTCCCTTTGGTTTGCATTCGTTCGTTTTCACCACT
ATAGGCTTTATGGTAGGAAAGGTGCAGGGAAGATATCATATCGATAGAGTATTCGCCCCCGCGGTACTGGCAGGCTTTGC
AATGATTTTCAAGGTGGGATTGGTGTTGGTATTGCGAGGAGTGTTTGGTCCAAATATCCAAGTGTATAGCGTGTTTTCAC
GGCAGCTTTGGATAGAAATGACGTTGAATATTGTGTTTGTCCCCTTTGTATTCGGGCTTTTGAATATGTTTCCGACCACT
TTTCTTTATAAGAGGTTTTCTTCGTAG

Upstream 100 bases:

>100_bases
AAACTTCTCTTGAACTTTCTCTTGACCCCGTTTTAGACCTTTTCCGTTTGGAATACGTTTTTATCCTCGACCTGTCCTTG
TCCCAAGAAGGACCGCACGG

Downstream 100 bases:

>100_bases
ATGCGTTATTTTTCTCTCCTTCCTGATCGTCATATGCTTTTTAGGATAAAGGTTCTCACCTGGCTCGTCGTGCTGGTTAT
GCTGTTGTACATGCGGCAGC

Product: rod shape-determining protein

Products: NA

Alternate protein names: Rod Shape-Determining Protein MreD

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFLSISPFGLHSFVFTT
IGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTT
FLYKRFSS

Sequences:

>Translated_168_residues
MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFLSISPFGLHSFVFTT
IGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTT
FLYKRFSS
>Mature_168_residues
MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAGIIFDFLSISPFGLHSFVFTT
IGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRGVFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTT
FLYKRFSS

Specific function: Unknown

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18818; Mature: 18818

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IIFDFLSISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRG
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTFLYKRFSS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRLIAWSVGTSFLFSIVEMAVFVHVSYLSIMPDLVLLVVLFTSIHNGVVAGIWTGFIAG
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IIFDFLSISPFGLHSFVFTTIGFMVGKVQGRYHIDRVFAPAVLAGFAMIFKVGLVLVLRG
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFGPNIQVYSVFSRQLWIEMTLNIVFVPFVFGLLNMFPTTFLYKRFSS
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA