| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025701
Identifier: 189025701
GI number: 189025701
Start: 498754
End: 499695
Strand: Reverse
Name: 189025701
Synonym: TPASS_0470
Alternate gene names: NA
Gene position: 499695-498754 (Counterclockwise)
Preceding gene: 189025703
Following gene: 189025700
Centisome position: 43.85
GC content: 60.3
Gene sequence:
>942_bases ATGTGCCAAAAATCCTCACCGTGCACCTACGCACGCGTACGCTCCCTTCCATCCGTTCGCTTATTCTCCTTTCTTGCGCT CGCATTTGCGTCCTTCCTGCGGGCAGAGGATGCCTTTGACCACTTTCGTGAAGGAGAGCGCCTCCTTTCCTTACAGCAGG CACAGCAGGCCATCGGTCCACTTCACAAAGCAGCACAGCAAAAACCCGCCCACCCGAAAGCAGCACTCTACTTGGGAATG GCGTACCTACAGACAGGACGCTACACGCAGGCAATCCAGTGGCTGCAAAACCCACCAGTACACAGTCAGGAATATGCGCA CCTATACGCCTACAATCTCGGGAACGTATACTTCGTGCAACATCGCTACGAGGAAGCCCAACATGCGTATGAGCAGGCCC TCGCCCTCAAGCACGATTACCCTCCTGCCTTGCTCAATCGCGCAAACACTGCCATGAAGCGACAAGCCTATGCACACGCA CTGGCTGACTATAAAAAGTACGTGTCCCAAAACCCGACTGCTTCACAACACTACGAAGTGCAGCGTATGATAGCGGCGCT TGAGCAGTGGCTGCAGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGG AAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGG CGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGGAAGCCCGGCGCAAGGA GGCGGAGGAAGCCCGGCGCAAGGAGGCGGAGTTTGAAGCTCTCAAGCGCGCGCTTAGACTGAAACAAGCGGAGGACGCGC GTACCCTCTCCACTGGATCGGAGGACACCGTCCCCTATCAGGAGGAACACAACCTTGAATAA
Upstream 100 bases:
>100_bases AAACGAGCAAAAAGACGATACTTGACGAGAACGCCGCTGCCAGCAGTGCCATGTACGCGGACATGCCGCCCATGGTAGCG CACCCTAGAAGGAATGTCAA
Downstream 100 bases:
>100_bases TGTGCACAAGACGTTCATTGCACTCGCCGCGGGGCTGGTGCTGCTTCTTGCGGTAGTTGCCGGGTTCAGTCTCTTTTCCC GGGGGGTGGTGCGCGCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE
Sequences:
>Translated_313_residues MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE >Mature_313_residues MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGPLHKAAQQKPAHPKAALYLGM AYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQHRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHA LADYKKYVSQNPTASQHYEVQRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGSEDTVPYQEEHNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36514; Mature: 36514
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGP CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHKAAQQKPAHPKAALYLGMAYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQ HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHEECCCEEEHH HRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHALADYKKYVSQNPTASQHYEV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDTVPYQEEHNLE CCCCCCCCCCCCC >Mature Secondary Structure MCQKSSPCTYARVRSLPSVRLFSFLALAFASFLRAEDAFDHFREGERLLSLQQAQQAIGP CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHKAAQQKPAHPKAALYLGMAYLQTGRYTQAIQWLQNPPVHSQEYAHLYAYNLGNVYFVQ HHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHEECCCEEEHH HRYEEAQHAYEQALALKHDYPPALLNRANTAMKRQAYAHALADYKKYVSQNPTASQHYEV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QRMIAALEQWLQRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEEAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKEAEEARRKEAEEARRKEAEEARRKEAEEARRKEAEFEALKRALRLKQAEDARTLSTGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EDTVPYQEEHNLE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA