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The map label for this gene is 189025700

Identifier: 189025700

GI number: 189025700

Start: 496809

End: 498761

Strand: Reverse

Name: 189025700

Synonym: TPASS_0468

Alternate gene names: NA

Gene position: 498761-496809 (Counterclockwise)

Preceding gene: 189025701

Following gene: 189025698

Centisome position: 43.77

GC content: 57.65

Gene sequence:

>1953_bases
TTGAATAATGTGCACAAGACGTTCATTGCACTCGCCGCGGGGCTGGTGCTGCTTCTTGCGGTAGTTGCCGGGTTCAGTCT
CTTTTCCCGGGGGGTGGTGCGCGCACGCCTACCTCGTGCAGCGGGCGAGACTCTCCTTGAGGAGGAGGGCGTTTCTGAGC
AAGAACTCGCCTGGCTGGAGACGAACCAGCTGCTGCAAGAGCAAGGGGAGGAACCCGGCGTGCTTGTGGACCATCACGTC
CAGCTCTCAGGGAATAGTGATGAAGAACAGTTCCTACAGACCCTTTCAGAGGAGTTAGCTCCCCAGCGCCCAGTTCCTTA
CGCGCCTACGCCGAGAGAGCGTATGCAAGAACAAGACACGCGGCAAAAGGGCGCGCGTGTTCTCACCCCGCCCCGGGGAG
TGTCTCGCACGGCGTCTTTTTCTCCTGAAAAATCGATAAAGCGGGCCGTGCAGATTGCAACGCGCCCGGAGGTGCGCGCA
CCTGCAGAAACTGCCACGCCACAGCACCACGTGCACGCGTTGCTTTCCGAAGGAAAAGAACTGACGGAACGACGTGATTA
TCCAGGAGCGGTGCGTGTGTTTAACAAAGCAATACGTGCACTCCCTGCCGGGGACGCGGTGTTCGCAGCAGACGCATACA
CCCGTATGGGAGAAGCTATGTACGCGCTTTCACAGCACGATAACCGTGACGGTTTTGAGCGGACACGGGCACTTGAAACG
GCAACCGTGTATGTGAAGGAAGCCTTGAGGCTCAACCCACGCTCCGCAGCTGCACACTACCTTGCCGCGTGCATTGCAGA
TGCGCAGCCTGATGACGACCAAACAACGGCTCTCACGTTGCTTGAACGCGCCGCGGCGCTTGACCGGCGCGAATATCGCT
ACAGCTATGAGTTGGGTAAGCGTCTTTTCGCAGTGCGCAGGTTTGCTGAGGCGCAGGAAGCGTTCAATGCGGCGACGGTT
GCGAATCCAAAGTTCGAGCCTGCATTTTTTAATCTGGGGCTCACCTGTAGGGTACGTGCAAAACACGATCTAGCCCTGCA
GGCGTTTAGGGCGGTCATCCGATTGAACCCAACGCACACGCGTGCGTGGATAGAGCTTGGACGTGTGCACGATGCACAAG
GAGAAGTGTCTGCTGCGCTTGCCGACTATCAAAAGGCGCAAGAATGCGCGGCTGCTGCGGAAGCGCATGATCTATACCTG
ACAGCCGCGCGTGAACGCGCACGTGTCCTGGCAAAAAGTGGTGCGAAGGAAGAGGCTGTGCGTCTGTTTCAAGAAATCCT
AGAGCGGGATTCTGAGGACGCGCTTACTTTGTACAACCTCGCAACCGTGCTGCTTGATCTCGATAGGAACGAAGAAGCGT
TAAAGCACGCGCAGCAGGCCGTCTACGCGAATGGATCGCAGGCACGCTTCCTCTACGCGTATGCGCTTGCAGCGCAAAAA
ACAGGGCGTGTGGATCTTGCCTTAACACAGTATCAGCTGGCTGCAGCACGGGACCCTGCACACGTGAAGGCTCACAACAA
TTTGGGCAAACTGTATTTGGACAAGGGAGCATTGCAAGAGGCGGAAACACACCTGCAGGCGGCTCTTGCCCACGATGCGC
AAAACTTTGAGGTAAACAGCAATCTAGGGAAGTTGTATGTCCTGCGCGCGCAGTGGGAGACGGCAATAGCGCACTACCGC
CGCGCCGCCACCGCACAGCCTCAAGACCGCGAGGCACAGTGCCAAGTGGCACGCGTGTATGTAGCGGCTGGACAGCCGCA
TGAAGCACTCCGCGCGTACCGTGCCGTGCTCGCTCAGGACGCACGCGCGTGGGACGTGTACCTAGAGGCTGGGAAACTAG
CAATCAAAGTGAACGAAAAAGAGTATGCACAAGAGGTACTAACGCAGCTTTTGGATCGCAATCCCGATTATGCACAGGCG
CCTCACGTGCGGCAGCTCCTATCCTCTTTGTAG

Upstream 100 bases:

>100_bases
GAAGCTCTCAAGCGCGCGCTTAGACTGAAACAAGCGGAGGACGCGCGTACCCTCTCCACTGGATCGGAGGACACCGTCCC
CTATCAGGAGGAACACAACC

Downstream 100 bases:

>100_bases
CGGTCAGCACTCCGGATGCTTTTGCGCAGAACATCAGCCTTTCTCTGGGTTATTTCTGATTCCCCACCGCCCCTCCTGAC
TCCTTCCTGCATGCACAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap

Number of amino acids: Translated: 650; Mature: 650

Protein sequence:

>650_residues
MNNVHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLETNQLLQEQGEEPGVLVDHHV
QLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDTRQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRA
PAETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALET
ATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGKRLFAVRRFAEAQEAFNAATV
ANPKFEPAFFNLGLTCRVRAKHDLALQAFRAVIRLNPTHTRAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYL
TAARERARVLAKSGAKEEAVRLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQK
TGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNSNLGKLYVLRAQWETAIAHYR
RAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQDARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQA
PHVRQLLSSL

Sequences:

>Translated_650_residues
MNNVHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLETNQLLQEQGEEPGVLVDHHV
QLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDTRQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRA
PAETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALET
ATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGKRLFAVRRFAEAQEAFNAATV
ANPKFEPAFFNLGLTCRVRAKHDLALQAFRAVIRLNPTHTRAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYL
TAARERARVLAKSGAKEEAVRLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQK
TGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNSNLGKLYVLRAQWETAIAHYR
RAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQDARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQA
PHVRQLLSSL
>Mature_650_residues
MNNVHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLETNQLLQEQGEEPGVLVDHHV
QLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDTRQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRA
PAETATPQHHVHALLSEGKELTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALET
ATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGKRLFAVRRFAEAQEAFNAATV
ANPKFEPAFFNLGLTCRVRAKHDLALQAFRAVIRLNPTHTRAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYL
TAARERARVLAKSGAKEEAVRLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQK
TGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNSNLGKLYVLRAQWETAIAHYR
RAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQDARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQA
PHVRQLLSSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=406, Percent_Identity=24.8768472906404, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI32307148, Length=406, Percent_Identity=24.8768472906404, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=317, Percent_Identity=24.9211356466877, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=317, Percent_Identity=24.9211356466877, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17647755, Length=442, Percent_Identity=23.9819004524887, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585827, Length=442, Percent_Identity=23.9819004524887, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24585829, Length=442, Percent_Identity=23.9819004524887, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72163; Mature: 72163

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
TNQLLQEQGEEPGVLVDHHVQLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDT
HHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRAPAETATPQHHVHALLSEGKE
HHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHH
LTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALET
HHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGK
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFAVRRFAEAQEAFNAATVANPKFEPAFFNLGLTCRVRAKHDLALQAFRAVIRLNPTHT
HHHHHHHHHHHHHHHCHHHCCCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCHH
RAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYLTAARERARVLAKSGAKEEAV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQK
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
TGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNS
CCCEEEEEHHHHHHHCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEECC
NLGKLYVLRAQWETAIAHYRRAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQD
CCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHCC
ARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQAPHVRQLLSSL
CHHHEEEEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNNVHKTFIALAAGLVLLLAVVAGFSLFSRGVVRARLPRAAGETLLEEEGVSEQELAWLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHCCCCHHHHHHHH
TNQLLQEQGEEPGVLVDHHVQLSGNSDEEQFLQTLSEELAPQRPVPYAPTPRERMQEQDT
HHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
RQKGARVLTPPRGVSRTASFSPEKSIKRAVQIATRPEVRAPAETATPQHHVHALLSEGKE
HHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHH
LTERRDYPGAVRVFNKAIRALPAGDAVFAADAYTRMGEAMYALSQHDNRDGFERTRALET
HHHHCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ATVYVKEALRLNPRSAAAHYLAACIADAQPDDDQTTALTLLERAAALDRREYRYSYELGK
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFAVRRFAEAQEAFNAATVANPKFEPAFFNLGLTCRVRAKHDLALQAFRAVIRLNPTHT
HHHHHHHHHHHHHHHCHHHCCCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHHCCCCHH
RAWIELGRVHDAQGEVSAALADYQKAQECAAAAEAHDLYLTAARERARVLAKSGAKEEAV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
RLFQEILERDSEDALTLYNLATVLLDLDRNEEALKHAQQAVYANGSQARFLYAYALAAQK
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
TGRVDLALTQYQLAAARDPAHVKAHNNLGKLYLDKGALQEAETHLQAALAHDAQNFEVNS
CCCEEEEEHHHHHHHCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCCCEECC
NLGKLYVLRAQWETAIAHYRRAATAQPQDREAQCQVARVYVAAGQPHEALRAYRAVLAQD
CCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHEEEEEEEECCCCHHHHHHHHHHHHCC
ARAWDVYLEAGKLAIKVNEKEYAQEVLTQLLDRNPDYAQAPHVRQLLSSL
CHHHEEEEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA