| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025665
Identifier: 189025665
GI number: 189025665
Start: 461107
End: 461658
Strand: Direct
Name: 189025665
Synonym: TPASS_0432
Alternate gene names: NA
Gene position: 461107-461658 (Clockwise)
Preceding gene: 189025664
Following gene: 189025666
Centisome position: 40.47
GC content: 56.7
Gene sequence:
>552_bases GTGTCGGGGGGAGTAGGAGTGGGGAAGCGTCTGTGCTGTATCGCGCTGGTGATGCGCGCGTTCTGGTACCTCAGTGCGAA GGGAGTCAGTATCGCTTACGTGCCCGTTCATCGCAGTGGGGGCTCTCAAGATTCGAGCATGAGCACAGCAGTGGGCGATA CGCTCCTTAACGCCTTCTTCGACGAGGGAATGGTGGTTACGGCAGTACCGCCGGGTGTACACGACGGCCAGACTATAGCA GAAATTGCTGCATGTTTTGAAGTAATGCCCGATTACGCGTTGTTGGTGCAGTTTCATTCCGCTCGTCTCCCTGGTGGGGA AAGCCCTACCTCCCGTGCCCGCGGCGCTTGGTCTTCAGAGAGGTTCCGTGCTGTGTGGACATTAGTGGATTTGCATACGC AGCGCGCGTGTGTCTATGCGTGTGTCGCCCCATACAGGGAGAGTATTCCCGTTTCTGAGTGTGTTGACGTCGTTACCCGT TGTATTGCGGAGCAGGCAATTTCGTACATACGGGTGGGCACGAGCACCGATACAGCCGGAGTTCAGTTATAG
Upstream 100 bases:
>100_bases GCTGGTGCCGACATCTCTCCTGCCACCTGCTACAGTGTCAGGTTCATCGGGGAATTGAGGAAACTGTTATCCGCGCTCCC CATCTTCCGATACTGGATCG
Downstream 100 bases:
>100_bases AAAATAGGGAATACGTAAGGTGTCTGCAGCGTCGCTTCAGCTGGGAGGAGTCTTATGATTAAACGCCACATGTTCGCAAA AAGGGGTGTCAAAGGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSGGVGVGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSGGSQDSSMSTAVGDTLLNAFFDEGMVVTAVPPGVHDGQTIA EIAACFEVMPDYALLVQFHSARLPGGESPTSRARGAWSSERFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTR CIAEQAISYIRVGTSTDTAGVQL
Sequences:
>Translated_183_residues MSGGVGVGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSGGSQDSSMSTAVGDTLLNAFFDEGMVVTAVPPGVHDGQTIA EIAACFEVMPDYALLVQFHSARLPGGESPTSRARGAWSSERFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTR CIAEQAISYIRVGTSTDTAGVQL >Mature_182_residues SGGVGVGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSGGSQDSSMSTAVGDTLLNAFFDEGMVVTAVPPGVHDGQTIAE IAACFEVMPDYALLVQFHSARLPGGESPTSRARGAWSSERFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTRC IAEQAISYIRVGTSTDTAGVQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y432_TREPA (O83447)
Other databases:
- EMBL: AE000520 - PIR: E71326 - RefSeq: NP_218872.1 - ProteinModelPortal: O83447 - IntAct: O83447 - GeneID: 2610947 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0432 - NMPDR: fig|243276.1.peg.431 - TIGR: TP_0432 - HOGENOM: HBG732012 - ProtClustDB: CLSK2300214 - BioCyc: TPAL243276:TP_0432-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19538; Mature: 19406
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGVGVGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSGGSQDSSMSTAVGDTLLNAFF CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH DEGMVVTAVPPGVHDGQTIAEIAACFEVMPDYALLVQFHSARLPGGESPTSRARGAWSSE HCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHH RFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTRCIAEQAISYIRVGTSTDTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VQL CCC >Mature Secondary Structure SGGVGVGKRLCCIALVMRAFWYLSAKGVSIAYVPVHRSGGSQDSSMSTAVGDTLLNAFF CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH DEGMVVTAVPPGVHDGQTIAEIAACFEVMPDYALLVQFHSARLPGGESPTSRARGAWSSE HCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHH RFRAVWTLVDLHTQRACVYACVAPYRESIPVSECVDVVTRCIAEQAISYIRVGTSTDTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VQL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876