| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is coaX [H]
Identifier: 189025664
GI number: 189025664
Start: 460243
End: 461064
Strand: Direct
Name: coaX [H]
Synonym: TPASS_0431
Alternate gene names: 189025664
Gene position: 460243-461064 (Clockwise)
Preceding gene: 189025663
Following gene: 189025665
Centisome position: 40.39
GC content: 57.54
Gene sequence:
>822_bases ATGCTTTTGATAGACGTAGGGAACTCGCACGTAGTGTTCGGAATCCAAGGCGAGAATGGTGGCCGTGTGTGCGTGCGTGA GTTGTTTCGCCTTGCGCCTGACGCGCGTAAAACCCAAGATGAGTACTCGCTTCTCATCCATGCGCTTTGCGAACGTGCGG GGGTCGGCCGTGCTTCTCTCCGTGATGCGTTTATTTCCTCCGTCGTGCCTGTGTTGACAAAGACCGTTGCAGATGCGGTC GCTCAGATTAGCGGCGTCCAGCCGGTTGTCTTTGGCCCGTGGGCGTACGAGCACTTGCCGGTGCGCATACCAGAGCCAGT GCGCGCGGAAATTGGCACTGACTTGGTAGCCAACGCGGTGGCGGCCTATGTGCATTTCCGTTCTGCTTGCGTGGTAGTGG ATTGTGGAACAGCGCTCACCTTTACGGCGGTGGATGGCACGGGGTTGATTCAAGGGGTGGCAATTGCGCCTGGTCTGCGC ACTGCGGTGCAGTCTCTCCATACAGGAACGGCACAATTACCACTTGTTCCTCTTGCCCTGCCTGATTCCGTTCTGGGCAA GGATACTACGCATGCGGTGCAGGCGGGTGTGGTGCGGGGCACGCTCTTTGTTATTCGCGCTATGATTGCACAGTGTCAGA AAGAGTTAGGGTGCCGCTGTGCAGCGGTGATAACGGGGGGGCTTTCGCGTCTTTTCTCGTCAGAGGTGGACTTTCCTCCT ATCGATGCACAGCTGACGCTCTCAGGTCTTGCACATATTGCGCGGCTGGTGCCGACATCTCTCCTGCCACCTGCTACAGT GTCAGGTTCATCGGGGAATTGA
Upstream 100 bases:
>100_bases GACTATCGTTGGTTTGTGTGAGACGGTGGCGCTTCTGGTGATGGTTTTTGGTATTATCAACTGCTAGATGTGGTGAACGT TGTGGTATAGCGCTTCGACC
Downstream 100 bases:
>100_bases GGAAACTGTTATCCGCGCTCCCCATCTTCCGATACTGGATCGGTGTCGGGGGGAGTAGGAGTGGGGAAGCGTCTGTGCTG TATCGCGCTGGTGATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASLRDAFISSVVPVLTKTVADAV AQISGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLR TAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPP IDAQLTLSGLAHIARLVPTSLLPPATVSGSSGN
Sequences:
>Translated_273_residues MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASLRDAFISSVVPVLTKTVADAV AQISGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLR TAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPP IDAQLTLSGLAHIARLVPTSLLPPATVSGSSGN >Mature_273_residues MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASLRDAFISSVVPVLTKTVADAV AQISGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAVAAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLR TAVQSLHTGTAQLPLVPLALPDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPP IDAQLTLSGLAHIARLVPTSLLPPATVSGSSGN
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 28458; Mature: 28458
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASL CEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHH RDAFISSVVPVLTKTVADAVAQISGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHH AAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLRTAVQSLHTGTAQLPLVPLAL HHHHHHHCEEEEEECCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEC PDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPP CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC IDAQLTLSGLAHIARLVPTSLLPPATVSGSSGN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLLIDVGNSHVVFGIQGENGGRVCVRELFRLAPDARKTQDEYSLLIHALCERAGVGRASL CEEEEECCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHH RDAFISSVVPVLTKTVADAVAQISGVQPVVFGPWAYEHLPVRIPEPVRAEIGTDLVANAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHH AAYVHFRSACVVVDCGTALTFTAVDGTGLIQGVAIAPGLRTAVQSLHTGTAQLPLVPLAL HHHHHHHCEEEEEECCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEC PDSVLGKDTTHAVQAGVVRGTLFVIRAMIAQCQKELGCRCAAVITGGLSRLFSSEVDFPP CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC IDAQLTLSGLAHIARLVPTSLLPPATVSGSSGN CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]