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The map label for this gene is atpD1

Identifier: 189025661

GI number: 189025661

Start: 457265

End: 457885

Strand: Direct

Name: atpD1

Synonym: TPASS_0428

Alternate gene names: 189025661

Gene position: 457265-457885 (Clockwise)

Preceding gene: 189025660

Following gene: 189025662

Centisome position: 40.13

GC content: 50.56

Gene sequence:

>621_bases
ATGGCGGTGCGCTTAACCAAAAATGAACTGAAACGTCAAAAAGAGACGCTCAAGACGTTTCGCCGTTTTCTCCCTACGCT
TCAGCTTAAAAAGCAGCAGTTGTATGCTGAGATCCGTGCCGTTGAGGCGCGCGCTTCTGAAGTACGTTCCCGTGCAGATG
CCCTGCGTCAGGATGTTCAGCAGTGGGTTGCAGTTTTTTCTGAAAGCGGTGTGTTCGACGCGCGTTTGCTCCGCGTGCAA
GAGGTAAAGAAAACGTATGCTAGCATTGCAGGTGTGCGTATTCCCTGCTTTTTAGAAGTGCACTTTGCTTGTCCTCCCTA
TGACTTATATCGTGTTCCTCTGTGGGTGGATACTGCAGTGCGCAAAATGCAGGAAGTGCTAAGCTTAGACTTGGAGGCGC
ATGTTCTCGACGAACAGGCGCTTCTCCTGGGTGCAGAGTTGCGGACTACAACGCAGCGTGTTAACCTCTTTGAAAAAGTT
AAGATTCCTGAGACGCGGGCATGCATACGGAAAATAACGGTGTACCTCGGTGATCAGCAGGTTGCTGCAGTAGTGCGGGG
GAAGATGTCTAAGAAGAATCTGGTAGACGTGAGTCGGATGGAACAAGAGGATACACGGTGA

Upstream 100 bases:

>100_bases
ATACGGGGTGGAAAATTCTGGGCCGGTGTTTCACCCCAGAGGAGACGGGGATTCGCTCTGATTTGATTAACACGTATTGG
CCTGCGTAGGGTGGTGACCG

Downstream 100 bases:

>100_bases
TAGTTCCTATGAAAAAGGTAACGCTTCTGGTGCTCGGTTCTGAGCAAGAGCGTTCGCTGCAGGCGTTGCGTTCCTTTGGT
GCTGTGCATGTGCAGTTGCG

Product: V-type ATP synthase subunit D

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit D 1

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MAVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQQWVAVFSESGVFDARLLRVQ
EVKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAVRKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKV
KIPETRACIRKITVYLGDQQVAAVVRGKMSKKNLVDVSRMEQEDTR

Sequences:

>Translated_206_residues
MAVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQQWVAVFSESGVFDARLLRVQ
EVKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAVRKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKV
KIPETRACIRKITVYLGDQQVAAVVRGKMSKKNLVDVSRMEQEDTR
>Mature_205_residues
AVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQQWVAVFSESGVFDARLLRVQE
VKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAVRKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKVK
IPETRACIRKITVYLGDQQVAAVVRGKMSKKNLVDVSRMEQEDTR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VATD1_TREPA (O83443)

Other databases:

- EMBL:   AE000520
- PIR:   A71326
- RefSeq:   NP_218868.1
- ProteinModelPortal:   O83443
- GeneID:   2610934
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0428
- NMPDR:   fig|243276.1.peg.427
- TIGR:   TP_0428
- HOGENOM:   HBG352980
- OMA:   LFEKVMI
- ProtClustDB:   PRK02195
- BioCyc:   TPAL243276:TP_0428-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00271
- InterPro:   IPR002699
- TIGRFAMs:   TIGR00309

Pfam domain/function: PF01813 ATP-synt_D

EC number: 3.6.3.14

Molecular weight: Translated: 23803; Mature: 23672

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQ
CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWVAVFSESGVFDARLLRVQEVKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHEECCHHHHHHH
RKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKVKIPETRACIRKITVYLGDQQ
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
VAAVVRGKMSKKNLVDVSRMEQEDTR
HHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVRLTKNELKRQKETLKTFRRFLPTLQLKKQQLYAEIRAVEARASEVRSRADALRQDVQ
CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QWVAVFSESGVFDARLLRVQEVKKTYASIAGVRIPCFLEVHFACPPYDLYRVPLWVDTAV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHEECCHHHHHHH
RKMQEVLSLDLEAHVLDEQALLLGAELRTTTQRVNLFEKVKIPETRACIRKITVYLGDQQ
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH
VAAVVRGKMSKKNLVDVSRMEQEDTR
HHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876