Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025656

Identifier: 189025656

GI number: 189025656

Start: 452101

End: 452907

Strand: Direct

Name: 189025656

Synonym: TPASS_0423

Alternate gene names: NA

Gene position: 452101-452907 (Clockwise)

Preceding gene: 189025655

Following gene: 189025657

Centisome position: 39.68

GC content: 55.64

Gene sequence:

>807_bases
ATGCGCGTATTCGTGTCTTGGCATAAGCAAAAGGATAAGGGGGAGCGCGAACGCGCAGGTGCGCTGCAGGGAGCGTGCAT
AGGTACGCCTGAGCACCGCCAGGTTTTTGCGCTGGTAGGAAGAAGTGGCAGCGGAAAGAGTTTTCGTGCGCAGATAGTGA
TGCGGCGTTTTGATATAGCGTTCGTTATAGACGATGGATTGCTTATTCGTGAGGATAAGATTATTGCAGGTCGCTCGGCA
AAGCAGGAAAGGACGCTGCTTGCGGCCATACGGGTTGCGCTCTTCGAGAACACGATGCACCGTCGCGTAGTTGCCCGTGT
GTTGACGTATTTTCTGTGTGGGTCACAGAACAAAAAGGTGCTCATTCTGGGGACTTCAGAGAGGATGGTGCGCAGAATAG
CCCTTCGTGTGGGGCTTCCTGAACCTGGGCATATCATCCGCATTGAGGATATTGCCTCGAGCGAAGAAATTGCCTGCGCG
CTGCGCACACGGCACGTGGAGGGCACGCACGTCATTCCAGTTCCCTCTGGGGAGGTACGCAAGAGCTATCCTAAGATCTT
TTATGAAAGGATAAAACTCTTGCTGCGTAGAGAGGCAGGTGCGGAACGAATAGGACGGTGGGCGCACGCCATATGGCATG
AGGGGCTCAAGCGTGCGTGCAGCGGCGCGCACGCGCATGTATTTGAAAAATCAATAGTGCGTCCACCTTTCTCATGCAAT
CTGCGCGTGGTGGCGGCGACAGAGGGCACACAGGATGCGTCGCCTGTTGTGGTGCCGCCTCACGAGGAGCTCGCTCTCCA
GCAGTAG

Upstream 100 bases:

>100_bases
TGTGACAGCGTTCATTGATGCGCACAATGCGCGCAAAAGGGCGCCGCGTGCCCCGCTGTTGGTTCCGGACTTTTAGCTGT
CATGGGGAAAGCGAATTTAT

Downstream 100 bases:

>100_bases
GAGAGCGATGACAGGAGAGGCAGTAGTTTGTCCCGTAGCGTGTGGAGCCGGATGGTCGAAGTGTGTTATGCTTGTCCCGG
TGGGGACTTTTTAGTATACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MRVFVSWHKQKDKGERERAGALQGACIGTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIAFVIDDGLLIREDKIIAGRSA
KQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKVLILGTSERMVRRIALRVGLPEPGHIIRIEDIASSEEIACA
LRTRHVEGTHVIPVPSGEVRKSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCN
LRVVAATEGTQDASPVVVPPHEELALQQ

Sequences:

>Translated_268_residues
MRVFVSWHKQKDKGERERAGALQGACIGTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIAFVIDDGLLIREDKIIAGRSA
KQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKVLILGTSERMVRRIALRVGLPEPGHIIRIEDIASSEEIACA
LRTRHVEGTHVIPVPSGEVRKSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCN
LRVVAATEGTQDASPVVVPPHEELALQQ
>Mature_268_residues
MRVFVSWHKQKDKGERERAGALQGACIGTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIAFVIDDGLLIREDKIIAGRSA
KQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKVLILGTSERMVRRIALRVGLPEPGHIIRIEDIASSEEIACA
LRTRHVEGTHVIPVPSGEVRKSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCN
LRVVAATEGTQDASPVVVPPHEELALQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30084; Mature: 30084

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFVSWHKQKDKGERERAGALQGACIGTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIA
CEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCEE
FVIDDGLLIREDKIIAGRSAKQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKV
EEEECCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LILGTSERMVRRIALRVGLPEPGHIIRIEDIASSEEIACALRTRHVEGTHVIPVPSGEVR
EEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHHH
KSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
LRVVAATEGTQDASPVVVPPHEELALQQ
EEEEEECCCCCCCCCEEECCHHHHCCCC
>Mature Secondary Structure
MRVFVSWHKQKDKGERERAGALQGACIGTPEHRQVFALVGRSGSGKSFRAQIVMRRFDIA
CEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCEE
FVIDDGLLIREDKIIAGRSAKQERTLLAAIRVALFENTMHRRVVARVLTYFLCGSQNKKV
EEEECCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
LILGTSERMVRRIALRVGLPEPGHIIRIEDIASSEEIACALRTRHVEGTHVIPVPSGEVR
EEEECHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCHHH
KSYPKIFYERIKLLLRREAGAERIGRWAHAIWHEGLKRACSGAHAHVFEKSIVRPPFSCN
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
LRVVAATEGTQDASPVVVPPHEELALQQ
EEEEEECCCCCCCCCEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA