| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
Click here to switch to the map view.
The map label for this gene is surE
Identifier: 189025652
GI number: 189025652
Start: 448111
End: 448674
Strand: Direct
Name: surE
Synonym: TPASS_0419
Alternate gene names: 189025652
Gene position: 448111-448674 (Clockwise)
Preceding gene: 189025651
Following gene: 189025653
Centisome position: 39.33
GC content: 58.51
Gene sequence:
>564_bases ATGAGGATACTACTGACAAACGATGATGGGTATCAGGCAGCAGGCATTCGCGCGCTGCATGCGGCGCTGAAAGCAGCGCC TGAGGGGTATGAGGTGACGGTAGTTGCGCCGGACAGAGATCGTTCTGCAGTTTCGCATGGGATTACTACGCTCGAGCCGG TGACCGTAAAGGAAGTGGAGCCAGGTATTTGGTCGTGCTCAGGGACGCCGGTGGATTGTGTGAATCGCGCGTTACGCCAG GTGTGCGTGGGTACACCGCCGGATGTGGTGGTGTCAGGAATTAACGAAGGGGAGAATCTGGGGACTGATATTGTGTTCTC GGGAACGGTTGCCGCAGCACGGCAGGCGGTGATGTATGGGATTGCGGGGATTGCAGCGAGCCTGTTGCCCGTTTCTGATT TTGGAACAGGCTGCCGTTTCCAGGCGCTTGCCCGCTTTGTGGCGCGTCACGTGCGGGCGTTGGCTGCACTTTCCTCCGAG GACGTGTTGGTGAACATAAACGCGCGATCGGCACAGGCGTATGCGCGTGCTTGTTACGCGCGCGTTGCGTCGTCGGATAT ATGA
Upstream 100 bases:
>100_bases ACTTTGAGCCGTACCTAGAAAGGCTCGACGAGTACGAGCGCATCTTCGGTTTCAAAGCAGCGGCGTATGAGGTACAGTGC TCTGAAGGGGCCCGGGTGTT
Downstream 100 bases:
>100_bases GGAACGTGGGGCGGTGCGCCAGGCGGGCCTTGCTCACGTGTTTGAGTACCAGGGTGGAGCGGCGCATACAGGCGCGGTGC AGGACAGCGATTGGGCGGTT
Product: survival protein
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRILLTNDDGYQAAGIRALHAALKAAPEGYEVTVVAPDRDRSAVSHGITTLEPVTVKEVEPGIWSCSGTPVDCVNRALRQ VCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYGIAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSE DVLVNINARSAQAYARACYARVASSDI
Sequences:
>Translated_187_residues MRILLTNDDGYQAAGIRALHAALKAAPEGYEVTVVAPDRDRSAVSHGITTLEPVTVKEVEPGIWSCSGTPVDCVNRALRQ VCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYGIAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSE DVLVNINARSAQAYARACYARVASSDI >Mature_187_residues MRILLTNDDGYQAAGIRALHAALKAAPEGYEVTVVAPDRDRSAVSHGITTLEPVTVKEVEPGIWSCSGTPVDCVNRALRQ VCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYGIAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSE DVLVNINARSAQAYARACYARVASSDI
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=129, Percent_Identity=46.5116279069767, Blast_Score=95, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_TREPA (O83434)
Other databases:
- EMBL: AE000520 - PIR: A71328 - RefSeq: NP_218859.1 - ProteinModelPortal: O83434 - SMR: O83434 - IntAct: O83434 - GeneID: 2610899 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0419 - NMPDR: fig|243276.1.peg.418 - TIGR: TP_0419 - HOGENOM: HBG250967 - OMA: GTSHALS - ProtClustDB: CLSK2300210 - BioCyc: TPAL243276:TP_0419-MONOMER - BRENDA: 3.1.3.5 - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 19541; Mature: 19541
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLTNDDGYQAAGIRALHAALKAAPEGYEVTVVAPDRDRSAVSHGITTLEPVTVKEVE CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCCEEHEECC PGIWSCSGTPVDCVNRALRQVCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYG CCEEECCCCCHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCEEECCHHHHHHHHHHHH IAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSEDVLVNINARSAQAYARACYA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH RVASSDI HHHCCCC >Mature Secondary Structure MRILLTNDDGYQAAGIRALHAALKAAPEGYEVTVVAPDRDRSAVSHGITTLEPVTVKEVE CEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCCCCCEEHEECC PGIWSCSGTPVDCVNRALRQVCVGTPPDVVVSGINEGENLGTDIVFSGTVAAARQAVMYG CCEEECCCCCHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCEEECCHHHHHHHHHHHH IAGIAASLLPVSDFGTGCRFQALARFVARHVRALAALSSEDVLVNINARSAQAYARACYA HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH RVASSDI HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876