Click here to switch to the map view.

The map label for this gene is flgB [H]

Identifier: 189025629

GI number: 189025629

Start: 423013

End: 423423

Strand: Direct

Name: flgB [H]

Synonym: TPASS_0396

Alternate gene names: 189025629

Gene position: 423013-423423 (Clockwise)

Preceding gene: 189025628

Following gene: 189025630

Centisome position: 37.12

GC content: 48.18

Gene sequence:

>411_bases
ATGAATAGTTTTACCAGAACGGTGGATCTTTTGCATCGTGCTTTGGATGTCAACGCGTTGCGCTATGAAGTGACGGCGAA
TAATCTTGCGAACGCAGAGGTTCCAGGGTTCAAGCGGACGGACGTAAACTTTGAAGCAGAGCTCAAGCGTGCTCTGGATT
CTCAAAGAAATGAGACAAGTTTTTTCAAGCAGGCAACTGCGGGGACGAATATGTTGTCCAGTGATGTTATCGACTACCGC
TCGGTGCGTCCGCGCCGCGTGTTAGACTATTTGACGGATGTGAAGGCGAACGGAAACAATGTGGATGCTGAGCAAGAAGC
CATGCATGTTCTCAAGATTCAGATGCACTATCAGATGTTGAGTCAGATGGTAGGGTTCCAGTATCGTCAGGTTGAGTCCG
TGTTACGTTAA

Upstream 100 bases:

>100_bases
GAATGTACACCAGTGCGAAGTGCTTTTTTCTGAGACTTTTTTGAAGAAGACTTTCTTAAGCTCGCTTTTTTTTGGTCGAC
AATGGGTCGGGGGTAGTCGG

Downstream 100 bases:

>100_bases
GCGTATGGAGAAGCGTGATGGGTTTGTTTAGTGGTATCAATATTGCCGCGACGGGTATGAGCGCGCAGCGCTTGGCGGGC
CGATGTGATCTCTGACAACA

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLSSDVIDYR
SVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQMLSQMVGFQYRQVESVLR

Sequences:

>Translated_136_residues
MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLSSDVIDYR
SVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQMLSQMVGFQYRQVESVLR
>Mature_136_residues
MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETSFFKQATAGTNMLSSDVIDYR
SVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQMLSQMVGFQYRQVESVLR

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15646; Mature: 15646

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETS
CCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
FFKQATAGTNMLSSDVIDYRSVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQML
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
SQMVGFQYRQVESVLR
HHHHCCHHHHHHHHHC
>Mature Secondary Structure
MNSFTRTVDLLHRALDVNALRYEVTANNLANAEVPGFKRTDVNFEAELKRALDSQRNETS
CCHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
FFKQATAGTNMLSSDVIDYRSVRPRRVLDYLTDVKANGNNVDAEQEAMHVLKIQMHYQML
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
SQMVGFQYRQVESVLR
HHHHCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA