| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is tprE
Identifier: 189025547
GI number: 189025547
Start: 329165
End: 331453
Strand: Direct
Name: tprE
Synonym: TPASS_0313
Alternate gene names: NA
Gene position: 329165-331453 (Clockwise)
Preceding gene: 189025546
Following gene: 189025552
Centisome position: 28.89
GC content: 56.75
Gene sequence:
>2289_bases ATGGGGTGCATGCGGTGGGGGAGTGTGCTGTGTGTGGTGGTGGGGGTAGGAGCGAGCGGGGGAGTGCTCGGACAGGAGTT TTCCCCGAAGCTAACTGGCTCTGCCACACTTGAGTGGGGCATCAGCTATGGCAAGGGGGTAGGCAGTCATGGCCAGGCCC CTGGTGCAGTTATGGGCACCGGTCCCTACAATCTGAAGCACGGGTTTCGTACTACCAACACGGTGGGAGTATCCTTTCCC CTGGTTATGCGCACCACCCACACGCGCCGTGGGCAGCACCCGGCACTGTATGCGGAGCTGAAGGTGGCGGACCTGCAGGC GGACCTGAGTCAGGGGAAGGCAGGTTTTGCCGTTAAGCGCAAGGGGAAGGTAGAGGCGACACTACACTGTTATGGGGCCT ACCTGACGATTGGGAAGAACCCCACGTTTCTGACGAACTTTGCCCGGCTGTGGAAGCCGTGGGTGACAGCGCAGTACCAG GAGGATGCGGTACAGTATGCGCCGGGGTTTGGGGGTTTAGGCGGCAAGGTTGGGTATCGGGCACAGGACATTGGGGGCAG TGGGGTCAGCCTTGATGTGGGGTTTCTCTCCTTTGCCTCTAACGGTGCCTGGGATAGTACTGACCCCACGCACAGTAAGT ATGGCTTTGGGGCAGACTTGAAGCTAATGTATGCGCGTGCAGGACACCCTCTGTGCACGGTAGAGCTTGCCAGCAATGTT ACGCTAGAAGACGGATACCTCATCGGTGCACAGAAGGACGCAAACAATCAGAACAAGGATAAACTGCTGTGGAATGTAGG GGGCCGACTCACCCTCGAACCAGGCGCCGGCTTCCGCTTCTCCTTCGCCCTCGACGCCGGTAACCAACACCAGAGTGAGG CTACCGCGGCGATGAGGACCGAAAGGACACGCGAGCGTGCACAGGAGGTTGCACTGGCAATTTTTACGCACGCTGCGCAG GAACAGGCTAAACAGGCGGCTGATACGGTTGGTAGCACCATAGATAACTCGGTGCAGGTGGCAAGATCAGTTATTACTCA GATCGCTGAAGGAGCGGTGAAGCAGGCACACGATCAGATTAAACGCACCAATGGAACACAAGTAGTGAATATTGACGTGA CCGTTCCGGTGAACGTCCGGCAAAGTCCTGTTCGGCAACCTGACTTGCCTTCACTTACCGCAATCGCAGCGCAATTGCCA AATGTAACCAAGCTCTTCTTCCTTAGTGCCGGGGCGGCCGCCGCGAGGCCCATTATCGGGCAGATTACTGGCGTGGTGCA GAACGTTATCACCCAGCAGGTACAGGCCCGGGTTGCGCAGTCGACCGCGGTTGCAATCCAGCAAGTTCTTGTGTTCAACC AGCAAACCGTCGCTGCAGAAAAAGCGAATACGCAAAAGCATACGATAAATGGCAAGTCATACGCGGCTCATATCGGCTCG TTGGTAAGTCTCGCTACCAACAGGGCGCTGCCTACTATACGACAGCGTGTTGAGCAAGCTGTTCAGGAAAATATACGGAG GATCAACGCTGTGGTGCAGCAAAAAGCGCAAACGCTCACCTCTTCCCAGGAACTGGAAAAGGCAGTGTATTCGTTGTTCG TTCCCACGTTTGAAAACCTGGTGTTGGGTGCAGGCGCGCTGCTGGCTCTTTTGGATATGCATCAGATTGCGGTGGACGCG CTGTTTACGGCGCAGTGGAAGTGGCTGTCTTCTGGCATATACTTTGCCACAGCACCGGCAAACGTTTTTGGCACCAGGGT GTTAGATAACACCATCGCAAGCTGTGGCGACTTTGCCGGATTCCTTAAGCTCGAAACTAAGAGCGGTGACCCCTACACCC ACCTGCTCACCGGCCTGGACGCCGGCGTTGAAACACGCGTGTACATCCCCCTCACCTATGCGCTATACAAAAATAACGGG GGGACGGCTGTGCGTGGCATTCAGGAAAAGGAGTATATCCGTCCACCGGTGGTGGGGAAGGCGTGGTGTAGCTATCGCAT CCCGGTGCAGGATTACGGCTGGGTGAAGCCAAGCGTTACGGTCCATGCCTCTACCAACCGTGCACACCTGAATGCCCCTG CTGCAGGTGGAGCAGTAGGAGCTACCTATCTAACCAAGGAGTACTGTGCACAGCTGCGTGCTGGTATTTCAGCCAGTCTC ATAGAGAAGACGGTATTCTCCCTTGATTGGGAACAGGGTATGCTCTCTGATGTCCCGTACCTGCTGGTGTCCGAGTGCCT CACCCAGGGAATCGGCCGCATCGTGTGCGGCGTCACCCTCTCCTGGTAG
Upstream 100 bases:
>100_bases GGGCGGGTAGGCAGGTGCAAGGAGTGGTGAGTTTTTGCGTGTGTGCAGGTGGCAGGGTGAGGGGGCTACTAGACAGGGCC GGGGGGGGGGGTGAGGTAGC
Downstream 100 bases:
>100_bases CTACTACCCGCCGCAGGGCGCCTTCCGGCAGGACTCTTTCCTCCCAGCGCCGTCCCCTAGGTGCGGAAGACGGGGCCAAA GCGCAACGTATACGGGATGC
Product: protein TprE
Products: NA
Alternate protein names: TPR Protein J; TPR Protein D; TPR Protein B; TPR Protein H; TPR Protein G; TPR Protein I; TPR Protein E; TPR Protein K; TPR Protein L; Outer Sheath Protein
Number of amino acids: Translated: 762; Mature: 761
Protein sequence:
>762_residues MGCMRWGSVLCVVVGVGASGGVLGQEFSPKLTGSATLEWGISYGKGVGSHGQAPGAVMGTGPYNLKHGFRTTNTVGVSFP LVMRTTHTRRGQHPALYAELKVADLQADLSQGKAGFAVKRKGKVEATLHCYGAYLTIGKNPTFLTNFARLWKPWVTAQYQ EDAVQYAPGFGGLGGKVGYRAQDIGGSGVSLDVGFLSFASNGAWDSTDPTHSKYGFGADLKLMYARAGHPLCTVELASNV TLEDGYLIGAQKDANNQNKDKLLWNVGGRLTLEPGAGFRFSFALDAGNQHQSEATAAMRTERTRERAQEVALAIFTHAAQ EQAKQAADTVGSTIDNSVQVARSVITQIAEGAVKQAHDQIKRTNGTQVVNIDVTVPVNVRQSPVRQPDLPSLTAIAAQLP NVTKLFFLSAGAAAARPIIGQITGVVQNVITQQVQARVAQSTAVAIQQVLVFNQQTVAAEKANTQKHTINGKSYAAHIGS LVSLATNRALPTIRQRVEQAVQENIRRINAVVQQKAQTLTSSQELEKAVYSLFVPTFENLVLGAGALLALLDMHQIAVDA LFTAQWKWLSSGIYFATAPANVFGTRVLDNTIASCGDFAGFLKLETKSGDPYTHLLTGLDAGVETRVYIPLTYALYKNNG GTAVRGIQEKEYIRPPVVGKAWCSYRIPVQDYGWVKPSVTVHASTNRAHLNAPAAGGAVGATYLTKEYCAQLRAGISASL IEKTVFSLDWEQGMLSDVPYLLVSECLTQGIGRIVCGVTLSW
Sequences:
>Translated_762_residues MGCMRWGSVLCVVVGVGASGGVLGQEFSPKLTGSATLEWGISYGKGVGSHGQAPGAVMGTGPYNLKHGFRTTNTVGVSFP LVMRTTHTRRGQHPALYAELKVADLQADLSQGKAGFAVKRKGKVEATLHCYGAYLTIGKNPTFLTNFARLWKPWVTAQYQ EDAVQYAPGFGGLGGKVGYRAQDIGGSGVSLDVGFLSFASNGAWDSTDPTHSKYGFGADLKLMYARAGHPLCTVELASNV TLEDGYLIGAQKDANNQNKDKLLWNVGGRLTLEPGAGFRFSFALDAGNQHQSEATAAMRTERTRERAQEVALAIFTHAAQ EQAKQAADTVGSTIDNSVQVARSVITQIAEGAVKQAHDQIKRTNGTQVVNIDVTVPVNVRQSPVRQPDLPSLTAIAAQLP NVTKLFFLSAGAAAARPIIGQITGVVQNVITQQVQARVAQSTAVAIQQVLVFNQQTVAAEKANTQKHTINGKSYAAHIGS LVSLATNRALPTIRQRVEQAVQENIRRINAVVQQKAQTLTSSQELEKAVYSLFVPTFENLVLGAGALLALLDMHQIAVDA LFTAQWKWLSSGIYFATAPANVFGTRVLDNTIASCGDFAGFLKLETKSGDPYTHLLTGLDAGVETRVYIPLTYALYKNNG GTAVRGIQEKEYIRPPVVGKAWCSYRIPVQDYGWVKPSVTVHASTNRAHLNAPAAGGAVGATYLTKEYCAQLRAGISASL IEKTVFSLDWEQGMLSDVPYLLVSECLTQGIGRIVCGVTLSW >Mature_761_residues GCMRWGSVLCVVVGVGASGGVLGQEFSPKLTGSATLEWGISYGKGVGSHGQAPGAVMGTGPYNLKHGFRTTNTVGVSFPL VMRTTHTRRGQHPALYAELKVADLQADLSQGKAGFAVKRKGKVEATLHCYGAYLTIGKNPTFLTNFARLWKPWVTAQYQE DAVQYAPGFGGLGGKVGYRAQDIGGSGVSLDVGFLSFASNGAWDSTDPTHSKYGFGADLKLMYARAGHPLCTVELASNVT LEDGYLIGAQKDANNQNKDKLLWNVGGRLTLEPGAGFRFSFALDAGNQHQSEATAAMRTERTRERAQEVALAIFTHAAQE QAKQAADTVGSTIDNSVQVARSVITQIAEGAVKQAHDQIKRTNGTQVVNIDVTVPVNVRQSPVRQPDLPSLTAIAAQLPN VTKLFFLSAGAAAARPIIGQITGVVQNVITQQVQARVAQSTAVAIQQVLVFNQQTVAAEKANTQKHTINGKSYAAHIGSL VSLATNRALPTIRQRVEQAVQENIRRINAVVQQKAQTLTSSQELEKAVYSLFVPTFENLVLGAGALLALLDMHQIAVDAL FTAQWKWLSSGIYFATAPANVFGTRVLDNTIASCGDFAGFLKLETKSGDPYTHLLTGLDAGVETRVYIPLTYALYKNNGG TAVRGIQEKEYIRPPVVGKAWCSYRIPVQDYGWVKPSVTVHASTNRAHLNAPAAGGAVGATYLTKEYCAQLRAGISASLI EKTVFSLDWEQGMLSDVPYLLVSECLTQGIGRIVCGVTLSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81544; Mature: 81412
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCMRWGSVLCVVVGVGASGGVLGQEFSPKLTGSATLEWGISYGKGVGSHGQAPGAVMGT CCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEC GPYNLKHGFRTTNTVGVSFPLVMRTTHTRRGQHPALYAELKVADLQADLSQGKAGFAVKR CCCCCCCCCCCCCEECEEEEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHCCCCCEEEEE KGKVEATLHCYGAYLTIGKNPTFLTNFARLWKPWVTAQYQEDAVQYAPGFGGLGGKVGYR CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE AQDIGGSGVSLDVGFLSFASNGAWDSTDPTHSKYGFGADLKLMYARAGHPLCTVELASNV EECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCE TLEDGYLIGAQKDANNQNKDKLLWNVGGRLTLEPGAGFRFSFALDAGNQHQSEATAAMRT EEECCEEEECCCCCCCCCCCEEEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHH ERTRERAQEVALAIFTHAAQEQAKQAADTVGSTIDNSVQVARSVITQIAEGAVKQAHDQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRTNGTQVVNIDVTVPVNVRQSPVRQPDLPSLTAIAAQLPNVTKLFFLSAGAAAARPIIG HHCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHH QITGVVQNVITQQVQARVAQSTAVAIQQVLVFNQQTVAAEKANTQKHTINGKSYAAHIGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCHHHHHHHH LVSLATNRALPTIRQRVEQAVQENIRRINAVVQQKAQTLTSSQELEKAVYSLFVPTFENL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGAGALLALLDMHQIAVDALFTAQWKWLSSGIYFATAPANVFGTRVLDNTIASCGDFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCE FLKLETKSGDPYTHLLTGLDAGVETRVYIPLTYALYKNNGGTAVRGIQEKEYIRPPVVGK EEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHCCCCCCCCC AWCSYRIPVQDYGWVKPSVTVHASTNRAHLNAPAAGGAVGATYLTKEYCAQLRAGISASL CHHEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHH IEKTVFSLDWEQGMLSDVPYLLVSECLTQGIGRIVCGVTLSW HHHHHHHCCCCCCCHHCCHHHHHHHHHHHCHHHEECCEEECC >Mature Secondary Structure GCMRWGSVLCVVVGVGASGGVLGQEFSPKLTGSATLEWGISYGKGVGSHGQAPGAVMGT CCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEC GPYNLKHGFRTTNTVGVSFPLVMRTTHTRRGQHPALYAELKVADLQADLSQGKAGFAVKR CCCCCCCCCCCCCEECEEEEEEEEECCCCCCCCCEEEEEEEEHHHHHHHHCCCCCEEEEE KGKVEATLHCYGAYLTIGKNPTFLTNFARLWKPWVTAQYQEDAVQYAPGFGGLGGKVGYR CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCE AQDIGGSGVSLDVGFLSFASNGAWDSTDPTHSKYGFGADLKLMYARAGHPLCTVELASNV EECCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCE TLEDGYLIGAQKDANNQNKDKLLWNVGGRLTLEPGAGFRFSFALDAGNQHQSEATAAMRT EEECCEEEECCCCCCCCCCCEEEEECCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHHH ERTRERAQEVALAIFTHAAQEQAKQAADTVGSTIDNSVQVARSVITQIAEGAVKQAHDQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRTNGTQVVNIDVTVPVNVRQSPVRQPDLPSLTAIAAQLPNVTKLFFLSAGAAAARPIIG HHCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHH QITGVVQNVITQQVQARVAQSTAVAIQQVLVFNQQTVAAEKANTQKHTINGKSYAAHIGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCHHHHHHHH LVSLATNRALPTIRQRVEQAVQENIRRINAVVQQKAQTLTSSQELEKAVYSLFVPTFENL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGAGALLALLDMHQIAVDALFTAQWKWLSSGIYFATAPANVFGTRVLDNTIASCGDFAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCE FLKLETKSGDPYTHLLTGLDAGVETRVYIPLTYALYKNNGGTAVRGIQEKEYIRPPVVGK EEEEEECCCCCHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHCCCCCCCCC AWCSYRIPVQDYGWVKPSVTVHASTNRAHLNAPAAGGAVGATYLTKEYCAQLRAGISASL CHHEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHH IEKTVFSLDWEQGMLSDVPYLLVSECLTQGIGRIVCGVTLSW HHHHHHHCCCCCCCHHCCHHHHHHHHHHHCHHHEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA