| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025546
Identifier: 189025546
GI number: 189025546
Start: 328061
End: 329074
Strand: Direct
Name: 189025546
Synonym: TPASS_0312
Alternate gene names: NA
Gene position: 328061-329074 (Clockwise)
Preceding gene: 189025544
Following gene: 189025547
Centisome position: 28.79
GC content: 60.75
Gene sequence:
>1014_bases ATGAGTTCACCGGTCATGCACGTGTGGATAGGAATGTTAATAGGAGCGGCAAACGTGGTACCGGGTCTTTCGGGGGGTAC GGTTGCGCTGCTCTGTGGCACGTGGGAATTACTGATTGCAGCAATAGCATTGGATAGAGCGCATCTGTGCCGTCAGTGGC GACGCTTGCTTGCCCTTGCGGGGGGAATAGTGGTGGGGATAGGGGTGTGCGCACGCTTTATGCGTGCGTTGTACGAAGCA TTTCCTCATCTTACGAATGCCTTTTTGGCCGGGGTGCTGTTAGCAAGTGTGCCGTCTTTGCGCAATCGGGTGCGTGCCGC CAGTGTTGCCGCGGAGCACTCAGTGCAGGCGGAAGGCACAGCGCGCGGGCATGTGGGGGACGCGGCACGCCGCGTGTGGT GTGCAGTTAGAATTATTTTCTTTGTGCTGCTTGGGTTTGTGGCAGTGTGTGCGTTTTCTCGCATGCAGCACGCGCGTGAC GCATCCTCTGCGACCGCCCCTGCGTCTGTTCAGACTACGGCGGTCCTTACTACTGCACACACGCGCGGATTTGTGGCGAC CGTGTGCGCAGGGGCGCTAGCGGCGGCGGCAATGCTCACGCCAGGATTTTCCGGTTCATTGGTATTGCTGCTGGCGGGGG TGTACCAACCGCTTTTGAGCGTGTTGTCTTTGCGCGCGGTGGAGCAGGGGGGAGGAGTGACTGGCGCGTCGGTAATAAGC AGGTTGTGTTCTGCGCACGTGTGGGGGCTCCTGTTTCCACTCTGTGTGGGAATGGGGATAGGGTTGCTGGGGGCGGCGCG GGTGCTCCGCGCATGGTTTCGGTTGTACCCGGTGTCCGCGCATGCGTGTGTGTGTGGGCTCGTGCTGGGATCGAGCGTGA CGTTGTTCCCACGGGGAACTGCAGCCGGGATGCAGGATCAGTTTACGCTTTTTATGGGATGTGTGGCTGGGTGTGTCGGT GCGTTTGCGCTCGCAAAGGTCTGCGCCTGGGGTGCGCGCGATGCGGGCGGGTAG
Upstream 100 bases:
>100_bases TGTTGCGCATGCGATGGACGCGGTTGAACTGAGAGAAGTGCCCGGATGAAGGGGAGGGTGCGTTTTTTCGCAGAAAGAAG ACCAGCAGGGGAGGCGGAGC
Downstream 100 bases:
>100_bases GCAGGTGCAAGGAGTGGTGAGTTTTTGCGTGTGTGCAGGTGGCAGGGTGAGGGGGCTACTAGACAGGGCCGGGGGGGGGG GTGAGGTAGCATGGGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALAGGIVVGIGVCARFMRALYEA FPHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGTARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARD ASSATAPASVQTTAVLTTAHTRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVIS RLCSAHVWGLLFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGTAAGMQDQFTLFMGCVAGCVG AFALAKVCAWGARDAGG
Sequences:
>Translated_337_residues MSSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALAGGIVVGIGVCARFMRALYEA FPHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGTARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARD ASSATAPASVQTTAVLTTAHTRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVIS RLCSAHVWGLLFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGTAAGMQDQFTLFMGCVAGCVG AFALAKVCAWGARDAGG >Mature_336_residues SSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALAGGIVVGIGVCARFMRALYEAF PHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGTARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARDA SSATAPASVQTTAVLTTAHTRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVISR LCSAHVWGLLFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGTAAGMQDQFTLFMGCVAGCVGA FALAKVCAWGARDAGG
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34712; Mature: 34581
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALA CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIVVGIGVCARFMRALYEAFPHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARDASSATAPASVQTTAVLTTAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEHHH TRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVIS HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RLCSAHVWGLLFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCC AAGMQDQFTLFMGCVAGCVGAFALAKVCAWGARDAGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSPVMHVWIGMLIGAANVVPGLSGGTVALLCGTWELLIAAIALDRAHLCRQWRRLLALA CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGIVVGIGVCARFMRALYEAFPHLTNAFLAGVLLASVPSLRNRVRAASVAAEHSVQAEGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ARGHVGDAARRVWCAVRIIFFVLLGFVAVCAFSRMQHARDASSATAPASVQTTAVLTTAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEHHH TRGFVATVCAGALAAAAMLTPGFSGSLVLLLAGVYQPLLSVLSLRAVEQGGGVTGASVIS HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RLCSAHVWGLLFPLCVGMGIGLLGAARVLRAWFRLYPVSAHACVCGLVLGSSVTLFPRGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCC AAGMQDQFTLFMGCVAGCVGAFALAKVCAWGARDAGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA