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The map label for this gene is tpn38b

Identifier: 189025532

GI number: 189025532

Start: 312314

End: 313345

Strand: Direct

Name: tpn38b

Synonym: TPASS_0298

Alternate gene names: 189025532

Gene position: 312314-313345 (Clockwise)

Preceding gene: 189025531

Following gene: 189025533

Centisome position: 27.41

GC content: 54.84

Gene sequence:

>1032_bases
ATGAACGGTGCGGTGTGTGTTCTCAGTGCGCTCATTGCAGTGTTTACTTGCTTTTCGTGTAGGCCTGCGGTGCAAGATGA
GCGCGCGGTGCGTATTGCCGTTTTTGTCCCAGGTTTTCGTCACGACAGTCCTGTGTATGCAATGTTGTGTGACGGTGTTG
AGCGTGCAGTTACGCAGGAACGCGCGACAGGGCGCAGCATTGGGCTTGATATCATCGAAGCGGGGCCGAACCAGGCGCTC
TGGCGCGAAAAGTTGGCGCATCTTGCTGCAGAACAGCGCTATCGTTTGATTGTGTCTTCCAACCCTGCACTCCCGCACGT
CCTTGAGCCTATTTTGCGTCAATTTCCCCTGCAGCGGTTTTTGGTTCTAGATGCCTACGCGCCGCAGGAGCACTCGCTGA
TTACCTTTCGCTATAACCAGTGGGAGCAAGCCTACCTTGCAGGACACCTTTCCGCGTTAGTGAGTGCGAGTGCTATGCGC
TTTGCAAATGCAGATAAAAAAATCGGTCTTATTGCGGGGCAGTCGTATCCGGTGATGACCCAGACTATTATTCCTGCCTT
TCTCGCAGGTGCCCGTGCAGTAGATCCTGCCTTTGAAGTCGATGTGCGCGTGGTGGGGAACTGGTATGACGCTGCAAAAA
GTGCAGACCTCGCACGGATTCTCTTTCACGAAGGGGTGGATGTTATGATGCCAATTTGCGGCGGTGCGAATCAGGGAGTA
CTTGCGGCCGCGCGGGAGCTCGGTTTTTATGTTTCGTGGTTTGACGATAACGGCTATGCGAGGGCACCGGGCTACGTAGT
TGGCAGTTCCGTTATGGAACAGGAGCGTCTTGCGTATGAGCAGACGCTGCGCTGCATTCGCGGTGAACTGCCATCTGCAG
GAGCCTGGACATTGGGGGTGAAAGACGGGTACGTACGTTTCATTGAAGAGGATCCCTTGTACCTGCAAACGGTACCCGAA
CCGATTCGTGTGCGGCAGTCTGCGTTGCTCAGGCGTATTCAAAGCGGTGAGCTTACGTTGCCGGTGCGTTGA

Upstream 100 bases:

>100_bases
TTTGGGGGCAGGGGTGAGGAGTAGTGCTCTGGTCTTTTCAGGCTGTGGGTGCCGGTAGGGTGCACCCTACGCGAGAGAGG
GATTTTTGGGGGGAGGTGTT

Downstream 100 bases:

>100_bases
TGATAGCTGAGCGCGGCGTTAGGGCATCTGCGCGCGGTGTGCTCTCGCTTCACCATATTGGGAAAACCTACCCGCGCGTG
ATGCCGCGTTCAAAGCGCGG

Product: exported protein TpN38b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNGAVCVLSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQERATGRSIGLDIIEAGPNQAL
WREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRFLVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMR
FANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGV
LAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGVKDGYVRFIEEDPLYLQTVPE
PIRVRQSALLRRIQSGELTLPVR

Sequences:

>Translated_343_residues
MNGAVCVLSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQERATGRSIGLDIIEAGPNQAL
WREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRFLVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMR
FANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGV
LAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGVKDGYVRFIEEDPLYLQTVPE
PIRVRQSALLRRIQSGELTLPVR
>Mature_343_residues
MNGAVCVLSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQERATGRSIGLDIIEAGPNQAL
WREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRFLVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMR
FANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGV
LAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGVKDGYVRFIEEDPLYLQTVPE
PIRVRQSALLRRIQSGELTLPVR

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TPN38_TREPA (Q56328)

Other databases:

- EMBL:   U12861
- EMBL:   AE000520
- PIR:   D71341
- RefSeq:   NP_218739.1
- ProteinModelPortal:   Q56328
- SMR:   Q56328
- IntAct:   Q56328
- GeneID:   2611215
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0298
- NMPDR:   fig|243276.1.peg.298
- TIGR:   TP_0298
- HOGENOM:   HBG731881
- OMA:   YLEQTSQ
- ProtClustDB:   CLSK873799
- BioCyc:   TPAL243276:TP_0298-MONOMER
- InterPro:   IPR003760

Pfam domain/function: PF02608 Bmp

EC number: NA

Molecular weight: Translated: 37882; Mature: 37882

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGAVCVLSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
RATGRSIGLDIIEAGPNQALWREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRF
HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHE
LVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMRFANADKKIGLIAGQSYPVMT
EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
QTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGV
HHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCH
LAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGV
HHHHHHCCEEEEEEECCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KDGYVRFIEEDPLYLQTVPEPIRVRQSALLRRIQSGELTLPVR
CCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MNGAVCVLSALIAVFTCFSCRPAVQDERAVRIAVFVPGFRHDSPVYAMLCDGVERAVTQE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
RATGRSIGLDIIEAGPNQALWREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRF
HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCHHHE
LVLDAYAPQEHSLITFRYNQWEQAYLAGHLSALVSASAMRFANADKKIGLIAGQSYPVMT
EEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
QTIIPAFLAGARAVDPAFEVDVRVVGNWYDAAKSADLARILFHEGVDVMMPICGGANQGV
HHHHHHHHHCCCCCCCCCEEEEEEEECHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCH
LAAARELGFYVSWFDDNGYARAPGYVVGSSVMEQERLAYEQTLRCIRGELPSAGAWTLGV
HHHHHHCCEEEEEEECCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
KDGYVRFIEEDPLYLQTVPEPIRVRQSALLRRIQSGELTLPVR
CCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8598278; 9665876