| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025533
Identifier: 189025533
GI number: 189025533
Start: 313342
End: 313566
Strand: Direct
Name: 189025533
Synonym: TPASS_0299
Alternate gene names: NA
Gene position: 313342-313566 (Clockwise)
Preceding gene: 189025532
Following gene: 189025534
Centisome position: 27.5
GC content: 64.44
Gene sequence:
>225_bases TTGATGATAGCTGAGCGCGGCGTTAGGGCATCTGCGCGCGGTGTGCTCTCGCTTCACCATATTGGGAAAACCTACCCGCG CGTGATGCCGCGTTCAAAGCGCGGGGTCTGGGGTATGTTCGGTCACCCTGGCAGGCGCGCAGTCGACGATGCGCACACAG CGCATGGCCCGTGTTCGGGCGCGCGTGAGACGGACGCGCTGAGCACAGCGTGCTCAGCGATGTGA
Upstream 100 bases:
>100_bases AGGATCCCTTGTACCTGCAAACGGTACCCGAACCGATTCGTGTGCGGCAGTCTGCGTTGCTCAGGCGTATTCAAAGCGGT GAGCTTACGTTGCCGGTGCG
Downstream 100 bases:
>100_bases ATCTTTCCTTTTTTACCGGTGAAATTCACGCGTTGTTGGGAAAAAATGGTGCAGGAAAATCCACGCTTGCGCATATTCTT TCGGGCTTTTGCGTGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MMIAERGVRASARGVLSLHHIGKTYPRVMPRSKRGVWGMFGHPGRRAVDDAHTAHGPCSGARETDALSTACSAM
Sequences:
>Translated_74_residues MMIAERGVRASARGVLSLHHIGKTYPRVMPRSKRGVWGMFGHPGRRAVDDAHTAHGPCSGARETDALSTACSAM >Mature_74_residues MMIAERGVRASARGVLSLHHIGKTYPRVMPRSKRGVWGMFGHPGRRAVDDAHTAHGPCSGARETDALSTACSAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y299_TREPA (O83321)
Other databases:
- EMBL: AE000520 - PIR: E71341 - RefSeq: NP_218740.1 - ProteinModelPortal: O83321 - GeneID: 2611558 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0299 - NMPDR: fig|243276.1.peg.299 - TIGR: TP_0299 - HOGENOM: HBG731962 - ProtClustDB: CLSK2300183 - BioCyc: TPAL243276:TP_0299-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7929; Mature: 7929
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIAERGVRASARGVLSLHHIGKTYPRVMPRSKRGVWGMFGHPGRRAVDDAHTAHGPCSG CCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ARETDALSTACSAM CCCHHHHHHHHHCC >Mature Secondary Structure MMIAERGVRASARGVLSLHHIGKTYPRVMPRSKRGVWGMFGHPGRRAVDDAHTAHGPCSG CCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC ARETDALSTACSAM CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876