Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025531

Identifier: 189025531

GI number: 189025531

Start: 311369

End: 312181

Strand: Direct

Name: 189025531

Synonym: TPASS_0297

Alternate gene names: NA

Gene position: 311369-312181 (Clockwise)

Preceding gene: 189025530

Following gene: 189025532

Centisome position: 27.33

GC content: 53.38

Gene sequence:

>813_bases
TTGCATTCTGACGCGCAGGGGTGTTTTAGGCGAGTAAATATGGAACAGAAGAGAATTTTGTGGATTGTCATCTCCCTGAG
TGTGTTTATGCTCATTATTTTTGGCGTCGCGCTTTTGTTGTACTCTCCTACCTATTCTTCTAATTCTGCAGGAGTGACCG
ACGTGTCCTCTTATGTTGAGCGTGGTGACGTACCTGAGCACCCGTCAGTGGATCCGAGCTTATGGCTAAAAAATCCTGAA
AAAATTCCTGAGCTGGGGAAGACTCCTGCGCCAACACAGAGGGCAATTCCTGATCTCACGGTGGTAAAGGATGTCCCTAC
CGCTCGTGCGAAAAGTCTTGATGTTTCTCCTCCGGCGCGTGCTGAGCGCACAGACGCGGCGCAGGACAGGAAAACTTCTC
CTGCCTCTGACACTCGGGAATCTGCAGAGTCAAAGGGTGCGTCAAAGCATGCACGGAGTGACCGAGCGTCTGCCAAGTCG
CCTCCCGCTACTCGTACCCGTGCTCCGCTTGTTGCACAGCGGGATGCGCGCGTGCGCGGTGCGTCCACGCAGCCTGCTGC
TCCTTCTGTCCTTTTCTGGGTGCAAGCCGCTTCGCTCTCAAGTAAGCTCAACGCCGAGCGTGCTCGGGGTGTGCTTGCAG
CTAGACACATGAAGGCAGAAATCTTCACGAAACGCACGGGTGCAGGCTTGCGTCACCGTGTGCGTGTCGGTCCTTTTACT
AATCGTACAGAAGCGGTATATAGTATGAAGAGCATCCGTGAGATCGCAGAGTTTAGCGGATGCTACGTTTTTCAAGAACG
CGTGAAAAACTAG

Upstream 100 bases:

>100_bases
CTGCGCAGAAGGGTTTCTATGCTCAAAGCATCGCGCAAAACGCCGATACCTACACGGTGGCCAACTGTGGGCGTGTTGCG
TCATTGGCGCGAAAAGTCGA

Downstream 100 bases:

>100_bases
TCTTTCTCCTTCTCTCTGGGTGGTGCAATGCGTTTGGGGGCAGGGGTGAGGAGTAGTGCTCTGGTCTTTTCAGGCTGTGG
GTGCCGGTAGGGTGCACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Sporulation Domain Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MHSDAQGCFRRVNMEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVERGDVPEHPSVDPSLWLKNPE
KIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPARAERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKS
PPATRTRAPLVAQRDARVRGASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFT
NRTEAVYSMKSIREIAEFSGCYVFQERVKN

Sequences:

>Translated_270_residues
MHSDAQGCFRRVNMEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVERGDVPEHPSVDPSLWLKNPE
KIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPARAERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKS
PPATRTRAPLVAQRDARVRGASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFT
NRTEAVYSMKSIREIAEFSGCYVFQERVKN
>Mature_270_residues
MHSDAQGCFRRVNMEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVERGDVPEHPSVDPSLWLKNPE
KIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPARAERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKS
PPATRTRAPLVAQRDARVRGASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFT
NRTEAVYSMKSIREIAEFSGCYVFQERVKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29581; Mature: 29581

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDAQGCFRRVNMEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVE
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RGDVPEHPSVDPSLWLKNPEKIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPAR
HCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCHHHCCCCCEEHHCCCCHHHCCCCCCCCCC
AERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKSPPATRTRAPLVAQRDARVRG
CHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCC
ASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFT
CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
NRTEAVYSMKSIREIAEFSGCYVFQERVKN
CHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MHSDAQGCFRRVNMEQKRILWIVISLSVFMLIIFGVALLLYSPTYSSNSAGVTDVSSYVE
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RGDVPEHPSVDPSLWLKNPEKIPELGKTPAPTQRAIPDLTVVKDVPTARAKSLDVSPPAR
HCCCCCCCCCCHHHCCCCHHHHHHCCCCCCCHHHCCCCCEEHHCCCCHHHCCCCCCCCCC
AERTDAAQDRKTSPASDTRESAESKGASKHARSDRASAKSPPATRTRAPLVAQRDARVRG
CHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCC
ASTQPAAPSVLFWVQAASLSSKLNAERARGVLAARHMKAEIFTKRTGAGLRHRVRVGPFT
CCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
NRTEAVYSMKSIREIAEFSGCYVFQERVKN
CHHHHHHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA