| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025520
Identifier: 189025520
GI number: 189025520
Start: 301411
End: 301776
Strand: Direct
Name: 189025520
Synonym: TPASS_0286
Alternate gene names: NA
Gene position: 301411-301776 (Clockwise)
Preceding gene: 189025519
Following gene: 189025521
Centisome position: 26.45
GC content: 48.09
Gene sequence:
>366_bases GTGATGAGTACTATACCTATAATTTTTAACGAGAAAAATGTTGCACACACGGTGGTGGGTGGTCAACTCTGTCCGGTGGC GTCTGCTTTTTTAGGTGCAGTAGTACTCAATCGGGGAGTGCGGTGGAATCGGGCAGAGTTTTTTGCGCAACTGACTACCC TTGGCATCGCGCCCATTGTATCGGTGGAGCGGAGTGCAGCAGCTCCAGATGTTACCGGTCTTGCTGAGCGTTTCCCCTTC GTTAAGTTTATCACACCGCTTGAGTGTATTTCGGTTGGAGAAATGATCAATTTAGGTGTTGCAGAACTTGATGTCATGTA TGTTTTAGTTCTGTGGAGCGACATGCGCATAGATCCGCAGGTATGA
Upstream 100 bases:
>100_bases GGCAATGCTTTCCAGCAGGATCTTGCACAGATTTGGCGGCGGGGACAGGATGTGTATCTTCAGCACGTTCGTGCAGTACA TGAAGGATTATGTGGGCAGT
Downstream 100 bases:
>100_bases GCCAGCACATACAGGATATCTTGCGCACGAATACGCACATGTGTATTGCGCCGCAATTGTGTTCTTCCCACAGTACTGTA CTCCCAACGCAAATTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIVSVERSAAAPDVTGLAERFPF VKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQV
Sequences:
>Translated_121_residues MMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIVSVERSAAAPDVTGLAERFPF VKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQV >Mature_121_residues MMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIVSVERSAAAPDVTGLAERFPF VKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13163; Mature: 13163
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIV CCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH SVERSAAAPDVTGLAERFPFVKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQ HCCCCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC V C >Mature Secondary Structure MMSTIPIIFNEKNVAHTVVGGQLCPVASAFLGAVVLNRGVRWNRAEFFAQLTTLGIAPIV CCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHH SVERSAAAPDVTGLAERFPFVKFITPLECISVGEMINLGVAELDVMYVLVLWSDMRIDPQ HCCCCCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA