Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189025519

Identifier: 189025519

GI number: 189025519

Start: 300360

End: 301439

Strand: Direct

Name: 189025519

Synonym: TPASS_0285

Alternate gene names: NA

Gene position: 300360-301439 (Clockwise)

Preceding gene: 189025518

Following gene: 189025520

Centisome position: 26.36

GC content: 48.8

Gene sequence:

>1080_bases
TTGTTTTGCACTTCGTTCATTTTTGAGAGCATTAAAACAGACATTAATTCTTTTGATCTAGAAACTATGATTGCGCCGGT
TGATGTGCGGCATCTGCGTCTGGAATTTTATACGAGTTCTAAGGCGCAGTTCTTGCAGTGTGCTGCATTTACCGATATCA
CTGCAGAAAATTACGCACAGCTTATCAGCGCACGTGAGCATGCGTTGCGCACAGTTCCTGCGTACTATGCGCTTGAGTTG
ACGCGTGCGTATCCGCTTTCTTCGTTGTATCGGCCAGTATCTTTTCCTGCGCAGGTGGAGAATGCTTCACTGATGCCAAA
AGAGGAAGCGTGTGCGTTGATCCGGCGCATTGCAGACTTTTCAGAACGTGCGGTCATTTCGCTTTCGGTATTTGGGGATC
CGGTGTTGTATCCTGCACTGTGTGACGTCGTACGTGAGATTCTCAAGTATCCGGGTTTGTCGGTGCTCATTGAGACAAGT
GGGTTGGGGTGGCAGGAGTCTGTAGTGCGTGATTTGTGCGAATGTGCGCGCAACAGTGCGCGCACTCCTTTTGCCATTGG
CTGGATTGTGTTTTTAGATGCGGTGAGTTCAGGCATGTACAGTCAGGTACACCGTGTGTCGCTGTCAGAAGCGGAATTTT
TTCTAAAAGAAGCGACGGAATTTGCAATGCAGGTACATGCGCAATGTCCGGGCGTGCTGTGGCCACAGATTTTCCGTATG
AATGAAAACGAAAAAGAGCTCGAGCCCTTTTACCGCACGTGGAAGGAGCGTGTGGGGCAGGTGATTGTTCAAAAGTATGA
TCATGTGTGCGGATTGCTTCCCGATCGGCGGGTTGCAGATCTATCTCCTTTGGAGAGGTATCCGTGTTGGCATCTAAAAC
GAGATATGATTATTTTCACTGATGGTCGAGTTCCGCTGTGCAAAGAAGATGTGCACTGTCGCCACGCGCTGGGCAATGCT
TTCCAGCAGGATCTTGCACAGATTTGGCGGCGGGGACAGGATGTGTATCTTCAGCACGTTCGTGCAGTACATGAAGGATT
ATGTGGGCAGTGTGATGAGTACTATACCTATAATTTTTAA

Upstream 100 bases:

>100_bases
AGTATAGTTTTGCAGATGGCTACCCGGAGGGGTTATTTGCTGCAGTTGTTGCGCCAGGACTTTTCCCCATCCTTGCTACT
TTGACTCAGGATGCACATAT

Downstream 100 bases:

>100_bases
CGAGAAAAATGTTGCACACACGGTGGTGGGTGGTCAACTCTGTCCGGTGGCGTCTGCTTTTTTAGGTGCAGTAGTACTCA
ATCGGGGAGTGCGGTGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFCTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQLISAREHALRTVPAYYALEL
TRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADFSERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETS
GLGWQESVVRDLCECARNSARTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRM
NENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFTDGRVPLCKEDVHCRHALGNA
FQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF

Sequences:

>Translated_359_residues
MFCTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQLISAREHALRTVPAYYALEL
TRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADFSERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETS
GLGWQESVVRDLCECARNSARTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRM
NENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFTDGRVPLCKEDVHCRHALGNA
FQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF
>Mature_359_residues
MFCTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQLISAREHALRTVPAYYALEL
TRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADFSERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETS
GLGWQESVVRDLCECARNSARTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRM
NENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFTDGRVPLCKEDVHCRHALGNA
FQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y285_TREPA (O83309)

Other databases:

- EMBL:   AE000520
- PIR:   H71343
- RefSeq:   NP_218726.1
- ProteinModelPortal:   O83309
- GeneID:   2611305
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0285
- NMPDR:   fig|243276.1.peg.285
- TIGR:   TP_0285
- HOGENOM:   HBG731954
- OMA:   YLELEVY
- ProtClustDB:   CLSK552892
- BioCyc:   TPAL243276:TP_0285-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41256; Mature: 41256

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQ
CCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHCCCHHHHHH
LISAREHALRTVPAYYALELTRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADF
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
SERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETSGLGWQESVVRDLCECARNSA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
RTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
NENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCEEEEE
DGRVPLCKEDVHCRHALGNAFQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCC
>Mature Secondary Structure
MFCTSFIFESIKTDINSFDLETMIAPVDVRHLRLEFYTSSKAQFLQCAAFTDITAENYAQ
CCHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEEEEECCCHHHHHHHHHHHCCCHHHHHH
LISAREHALRTVPAYYALELTRAYPLSSLYRPVSFPAQVENASLMPKEEACALIRRIADF
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
SERAVISLSVFGDPVLYPALCDVVREILKYPGLSVLIETSGLGWQESVVRDLCECARNSA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC
RTPFAIGWIVFLDAVSSGMYSQVHRVSLSEAEFFLKEATEFAMQVHAQCPGVLWPQIFRM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
NENEKELEPFYRTWKERVGQVIVQKYDHVCGLLPDRRVADLSPLERYPCWHLKRDMIIFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHCCCCEEEEE
DGRVPLCKEDVHCRHALGNAFQQDLAQIWRRGQDVYLQHVRAVHEGLCGQCDEYYTYNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876