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The map label for this gene is 189025518

Identifier: 189025518

GI number: 189025518

Start: 299761

End: 300420

Strand: Direct

Name: 189025518

Synonym: TPASS_0284

Alternate gene names: NA

Gene position: 299761-300420 (Clockwise)

Preceding gene: 189025517

Following gene: 189025519

Centisome position: 26.31

GC content: 54.55

Gene sequence:

>660_bases
ATGCGTGCCGATAAAGGGGCGGTGGGAACGGTTGCTGTGGTCTGTGCCTTTGATCTGAGCGATTATGCCTTTGTGCCCTT
GTGTGGCACGCGTGAGCAGTCGTGTATGAAAGCAGTGCCGGGGTTCGTGCCGTGCGTGGAGGTGAGGGGCTGTGAGAGTA
CAGCCGGGGTGGGGCGGCGTTGCGCTTTCGAGCGTGCTGTTACAGCTGCTTACGCGTTGCCTGGTTGCCATCAGGTGTGT
GTGTACGCGGATGCGGCGAGCGCCGCGAAGGTTGCGCGTTTTATGCAGTGCGCTACGCCTATTTTTCCGTCGCTGCGCGT
GAACGTTCTGGATGACATGCGAGTGAGCGCCTTCTTCGCGCATGTTGCACGCGTATGTGCGGAATACGCGCAATTGGGTG
AAGAACCTGAGGCTGTCTTTGTTCTGCGCGCAGACGCGCCCTTTATTGATAGTGTGGCGAGCGCCCAGTTATACGCGCAG
CATCGCGAATATCTTGCAGAGTATAGTTTTGCAGATGGCTACCCGGAGGGGTTATTTGCTGCAGTTGTTGCGCCAGGACT
TTTCCCCATCCTTGCTACTTTGACTCAGGATGCACATATTTGTTTTGCACTTCGTTCATTTTTGAGAGCATTAAAACAGA
CATTAATTCTTTTGATCTAG

Upstream 100 bases:

>100_bases
CATGAGCTGAGTATGTGATGATTCTTTTTCTCACTCGGTTGAGTGATCTTCGGGGCTGTGCTTTTAAAGTTCAGAAAAGT
TTTGAGCAAGGTTCTCCTGC

Downstream 100 bases:

>100_bases
AAACTATGATTGCGCCGGTTGATGTGCGGCATCTGCGTCTGGAATTTTATACGAGTTCTAAGGCGCAGTTCTTGCAGTGT
GCTGCATTTACCGATATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCESTAGVGRRCAFERAVTAAYALPGCHQVC
VYADAASAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFAHVARVCAEYAQLGEEPEAVFVLRADAPFIDSVASAQLYAQ
HREYLAEYSFADGYPEGLFAAVVAPGLFPILATLTQDAHICFALRSFLRALKQTLILLI

Sequences:

>Translated_219_residues
MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCESTAGVGRRCAFERAVTAAYALPGCHQVC
VYADAASAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFAHVARVCAEYAQLGEEPEAVFVLRADAPFIDSVASAQLYAQ
HREYLAEYSFADGYPEGLFAAVVAPGLFPILATLTQDAHICFALRSFLRALKQTLILLI
>Mature_219_residues
MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCESTAGVGRRCAFERAVTAAYALPGCHQVC
VYADAASAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFAHVARVCAEYAQLGEEPEAVFVLRADAPFIDSVASAQLYAQ
HREYLAEYSFADGYPEGLFAAVVAPGLFPILATLTQDAHICFALRSFLRALKQTLILLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y284_TREPA (O83308)

Other databases:

- EMBL:   AE000520
- PIR:   G71343
- RefSeq:   NP_218725.1
- ProteinModelPortal:   O83308
- IntAct:   O83308
- GeneID:   2611304
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0284
- NMPDR:   fig|243276.1.peg.284
- TIGR:   TP_0284
- HOGENOM:   HBG250937
- ProtClustDB:   CLSK2300178
- BioCyc:   TPAL243276:TP_0284-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23561; Mature: 23561

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS00338 SOMATOTROPIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCESTAGVGRR
CCCCCCCHHHHHHHEECCCCCCEEEECCCCCHHHHHHHCCCCCCEEEECCCCCHHCCHHH
CAFERAVTAAYALPGCHQVCVYADAASAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFA
HHHHHHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HVARVCAEYAQLGEEPEAVFVLRADAPFIDSVASAQLYAQHREYLAEYSFADGYPEGLFA
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AVVAPGLFPILATLTQDAHICFALRSFLRALKQTLILLI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRADKGAVGTVAVVCAFDLSDYAFVPLCGTREQSCMKAVPGFVPCVEVRGCESTAGVGRR
CCCCCCCHHHHHHHEECCCCCCEEEECCCCCHHHHHHHCCCCCCEEEECCCCCHHCCHHH
CAFERAVTAAYALPGCHQVCVYADAASAAKVARFMQCATPIFPSLRVNVLDDMRVSAFFA
HHHHHHHHHHHHCCCHHHEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HVARVCAEYAQLGEEPEAVFVLRADAPFIDSVASAQLYAQHREYLAEYSFADGYPEGLFA
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
AVVAPGLFPILATLTQDAHICFALRSFLRALKQTLILLI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876