Click here to switch to the map view.

The map label for this gene is parA [C]

Identifier: 189025506

GI number: 189025506

Start: 289681

End: 290442

Strand: Reverse

Name: parA [C]

Synonym: TPASS_0272

Alternate gene names: 189025506

Gene position: 290442-289681 (Counterclockwise)

Preceding gene: 189025508

Following gene: 189025505

Centisome position: 25.49

GC content: 48.16

Gene sequence:

>762_bases
ATGGGTAAAACCTTGGTGTTCGTAAATCAAAAGGGAGGGGTGGGTAAGACAACCTCTGCCATTAACTTGGGTGCGTATTT
AGCGCTTGCAGGAAAGAAAACCTTGCTCGTTGATTTTGATCCTCAAGGGAACATGTCCTCGGGTCTCGGCTTAGCTAGAG
GGTTGACCGTGTATGATCTTCTTGCAGGTAAGGCACACATCAACAGCGTGCTGCGCACTACACCAGTGCATAACCTTTTT
GCTATCCCCGCTTCCATCGATCTTTCTGGCGCGACGGTGGAACTAGTAGATGAACAAGACCGCGAGCTCTACCTTAAAAA
GATATTGGCAGAAGTAAAAGACACGTACGACTTTATCCTGATTGATTGTCCGCCCTCGCTGGGTATCCTCACATTGAATG
GACTTGCAGCGGCAAACGAGGTGTTCATCCCATTGCAGTGTGAGTATTTTGCACTTGAAGGCCTCACACTCTTACTGCAG
ACGGTAAAGCGTGTACAAAGTGGTCTGAATACCGCGCTTTCGATCGGAGGCATCTTCTTTACCATGTATGATACTAGAAC
TAAGCTGGCGCAAGAAGTGGTTAAGCAAGTGACAACCTATTTTGGGGACAAGGTGTTCAATACTATCATTCCTCGCAACG
TAAAGTTATCCGAAGCCCCTTCGCACGGGTTACCCATTAGTTCTTACGATGCACAGTGCGCAGGGGCACGGAGTTATGAG
AAGCTTGCACGGGAAATAGTGGCACGCGATGGGCAAAGATAA

Upstream 100 bases:

>100_bases
GTATCTCCTTACCAGGATTTACCCCATCGCATAGCTTCCCATTCAGACGCGCTTTCGAAGTCCTTTTATTTATTTAGAAA
GTGGAGTACACTCCGGCACC

Downstream 100 bases:

>100_bases
ATTAGGCAAAGGCATTGACGCGCTGCTGCAAGAAAGCTCAGATCGATACGATGTTCGTGATTCAGGCGGTGTGCAGACTG
TACACTATCTTGATCCCACG

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDLLAGKAHINSVLRTTPVHNLF
AIPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFILIDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQ
TVKRVQSGLNTALSIGGIFFTMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYE
KLAREIVARDGQR

Sequences:

>Translated_253_residues
MGKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDLLAGKAHINSVLRTTPVHNLF
AIPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFILIDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQ
TVKRVQSGLNTALSIGGIFFTMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYE
KLAREIVARDGQR
>Mature_252_residues
GKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDLLAGKAHINSVLRTTPVHNLFA
IPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFILIDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQT
VKRVQSGLNTALSIGGIFFTMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYEK
LAREIVARDGQR

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SOJ_TREPA (O83296)

Other databases:

- EMBL:   AE000520
- PIR:   B71346
- RefSeq:   NP_218713.1
- ProteinModelPortal:   O83296
- SMR:   O83296
- IntAct:   O83296
- GeneID:   2611625
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0272
- NMPDR:   fig|243276.1.peg.272
- TIGR:   TP_0272
- HOGENOM:   HBG756201
- OMA:   NLVGMEV
- ProtClustDB:   CLSK218621
- BioCyc:   TPAL243276:TP_0272-MONOMER
- InterPro:   IPR002586

Pfam domain/function: PF01656 CbiA

EC number: NA

Molecular weight: Translated: 27342; Mature: 27211

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDL
CCCEEEEEECCCCCCCCCHHEECCEEEEECCCEEEEEEECCCCCCCCCCHHHHCCHHHHH
LAGKAHINSVLRTTPVHNLFAIPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFIL
HHCHHHHHHHHHHCCCCCEEEECCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEE
IDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQTVKRVQSGLNTALSIGGIFF
EECCCCCCEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
TMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHH
KLAREIVARDGQR
HHHHHHHHCCCCC
>Mature Secondary Structure 
GKTLVFVNQKGGVGKTTSAINLGAYLALAGKKTLLVDFDPQGNMSSGLGLARGLTVYDL
CCEEEEEECCCCCCCCCHHEECCEEEEECCCEEEEEEECCCCCCCCCCHHHHCCHHHHH
LAGKAHINSVLRTTPVHNLFAIPASIDLSGATVELVDEQDRELYLKKILAEVKDTYDFIL
HHCHHHHHHHHHHCCCCCEEEECCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEE
IDCPPSLGILTLNGLAAANEVFIPLQCEYFALEGLTLLLQTVKRVQSGLNTALSIGGIFF
EECCCCCCEEEECCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
TMYDTRTKLAQEVVKQVTTYFGDKVFNTIIPRNVKLSEAPSHGLPISSYDAQCAGARSYE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHH
KLAREIVARDGQR
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876