Click here to switch to the map view.

The map label for this gene is parB

Identifier: 189025505

GI number: 189025505

Start: 288720

End: 289694

Strand: Reverse

Name: parB

Synonym: TPASS_0271

Alternate gene names: 189025505

Gene position: 289694-288720 (Counterclockwise)

Preceding gene: 189025506

Following gene: 189025499

Centisome position: 25.42

GC content: 53.13

Gene sequence:

>975_bases
ATGGGCAAAGATAAATTAGGCAAAGGCATTGACGCGCTGCTGCAAGAAAGCTCAGATCGATACGATGTTCGTGATTCAGG
CGGTGTGCAGACTGTACACTATCTTGATCCCACGCTGCTGCAGGCGAATCCACATCAGGCGCGTCGCACCTTTGCGCAGG
AATCTCTCGAGGAGCTTGCCGCGTCTATTCGTGAGCACGGGGTAATCCAGCCAGTCCTTGCGGAAAAAAACCAGGACGGA
AGCTGGGTCATTATCGCGGGGGAGCGTAGAACACGCGCTGCCATCCTTGCGGGGTTGAATCGGATACCTGTTATCGTGCG
CACCTGCGATCATGAAAAAAAGCTTGCCATCGCGCTCATTGAAAATGTTCAGCGAGAAAACCTGAATCCCCTGGAAGAGG
CGCGCGCCTATCAACATATCATGGATCTGGGTAATTTAAGTCATGAAGAGCTCGCACAGCGGGTTGGAAAAAACCGCAGT
ACCATTACCAATGCGCTGCGTCTTTTAAAACTGCCTCCTGAAGTTCAGCAGTCGCTTTCGTCTCGAACGCTGAGCGCAGG
GCATGCGCGCGCACTTCTGTCACTCACCGACATGCAGTTGTGTGTAAGCGTTGCTCAGTATGTAGTTACCCATGCGTTGT
CTGTACGTGCCGCAGAGGAGTGCGTTGCATGTCTTAATCGTGGCGGAAGTTTGCACGATTACGCTGGAGCTCGCGCGCAC
ACGGCGGCGTCTTCCCCTTCACCCGGCGGTTCTGCTACAGACATCACCCGCCTTCCTCCTTCTTCCCCATCGACGGATGC
GCAATTAGATGCGCGCATACGTAACGCAGACATCGCAGACATTGAACAGCAATTGTTGGAACAACTGGGAACCAAGGTGC
GCATCAGTGGGAATTTACAACGGGGGAGAATTGAGATCACGTATTTCTCCCAAGCAGAATTAGAAAGACTCTACGGGTTG
CTCAAGGCGCACTAA

Upstream 100 bases:

>100_bases
TCCGAAGCCCCTTCGCACGGGTTACCCATTAGTTCTTACGATGCACAGTGCGCAGGGGCACGGAGTTATGAGAAGCTTGC
ACGGGAAATAGTGGCACGCG

Downstream 100 bases:

>100_bases
TTCTGCGCCATGGTGCGCACAATCTCCTGCGCATGTTCCAAAAGCTGCGGACGCGTGTTGCGCGACGGTTGCATGAGGAC
CATATCAAACAGTGCGTTCA

Product: chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MGKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELAASIREHGVIQPVLAEKNQDG
SWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRS
TITNALRLLKLPPEVQQSLSSRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAH
TAASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQRGRIEITYFSQAELERLYGL
LKAH

Sequences:

>Translated_324_residues
MGKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELAASIREHGVIQPVLAEKNQDG
SWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRS
TITNALRLLKLPPEVQQSLSSRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAH
TAASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQRGRIEITYFSQAELERLYGL
LKAH
>Mature_323_residues
GKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELAASIREHGVIQPVLAEKNQDGS
WVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALIENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRST
ITNALRLLKLPPEVQQSLSSRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAHT
AASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQRGRIEITYFSQAELERLYGLL
KAH

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PARB_TREPA (O83295)

Other databases:

- EMBL:   AE000520
- PIR:   A71346
- RefSeq:   NP_218712.1
- ProteinModelPortal:   O83295
- IntAct:   O83295
- GeneID:   2611618
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0271
- NMPDR:   fig|243276.1.peg.271
- TIGR:   TP_0271
- HOGENOM:   HBG641230
- OMA:   TIVAKGM
- ProtClustDB:   CLSK218620
- BioCyc:   TPAL243276:TP_0271-MONOMER
- InterPro:   IPR004437
- InterPro:   IPR003115
- SMART:   SM00470
- TIGRFAMs:   TIGR00180

Pfam domain/function: PF02195 ParBc; SSF110849 ParBc

EC number: NA

Molecular weight: Translated: 35431; Mature: 35299

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELA
CCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHH
ASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALI
HHHHHCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
ENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRSTITNALRLLKLPPEVQQSLS
HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
SRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHH
TAASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCC
RGRIEITYFSQAELERLYGLLKAH
CCEEEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKDKLGKGIDALLQESSDRYDVRDSGGVQTVHYLDPTLLQANPHQARRTFAQESLEELA
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHHHHH
ASIREHGVIQPVLAEKNQDGSWVIIAGERRTRAAILAGLNRIPVIVRTCDHEKKLAIALI
HHHHHCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHH
ENVQRENLNPLEEARAYQHIMDLGNLSHEELAQRVGKNRSTITNALRLLKLPPEVQQSLS
HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH
SRTLSAGHARALLSLTDMQLCVSVAQYVVTHALSVRAAEECVACLNRGGSLHDYAGARAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHH
TAASSPSPGGSATDITRLPPSSPSTDAQLDARIRNADIADIEQQLLEQLGTKVRISGNLQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCC
RGRIEITYFSQAELERLYGLLKAH
CCEEEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876