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The map label for this gene is 189025502

Identifier: 189025502

GI number: 189025502

Start: 285102

End: 285755

Strand: Direct

Name: 189025502

Synonym: TPASS_0268

Alternate gene names: NA

Gene position: 285102-285755 (Clockwise)

Preceding gene: 189025501

Following gene: 189025503

Centisome position: 25.02

GC content: 58.26

Gene sequence:

>654_bases
TTGATCGGTTTCCCTTGCAGACGGGTAGCTCTCTTGGTCGCTAGGTTTCTTTTGCCCGTTGTGTTCTGTTTCGTGTGTAG
GGGGCTCTGTTCGCAGCAGTCTGGTCTTGCTTTCTACCGGGCGGGTAGTTACCGTGAGGCGATTAGATGCTGCGAGGAAG
CTATCGCACAGGGGTCTAAGGACCTTGAGCATTATCTCGTGCTTGCCTGGGCGCTTGTTGCGGTTGGGAAGTACCATGAG
GCTGCCCAGTGGGCCCTCGAGGGGCGCGCCGTTGCCGCCCATGATCCTCGCCTCATAGAGGCGCAGGCGGAGGCTTTCTG
CCACTTGGGGAGAAATGAAGAAGCGCTTAGGTTGTTTCAAGACTACATTGCGTGTGCCCCGAATGGAGCGCGGCAGACCG
CCGCGTATTATCTTATGGGGGAGATTTACCTGCGCACTTCGCGCTTCTTGCACGCAGATATCGCTTTTTCCGTCGCGCTC
CAGTTAGATTCGCTTAACGATTTCTGGTGGGCCCGCTTGGGCTATGCACGCGAGCGCGCGGGGGACTATCGCTATGCGTT
ACAGGCCTACGACCGAGCGCTCCAGCTGAATAGAGATCTGGCTGATGCTCGCCGGGGCAGGGAGCGGGTGCTGAGGTACG
TGTTCCGTAGGTAG

Upstream 100 bases:

>100_bases
TCTTCCCATGTGGGAGGTTGATAGGGGATGTTACCGCGCCAGAAGTTGTGCTTGAGAGTGGGTGCTTTTTCAGTGGCGTG
TGTAGTATGCCCGAATCGGG

Downstream 100 bases:

>100_bases
GTTTTCTTCGTGTTTTCCGTTCGCATCGAGACGCTTGGCTGTCGTCTGAATCATGTCGAGTCTGAGTCGCTGGCAGCGCT
CTTCTTGCAGGAGGGCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Protein; TPR Domain Protein

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIGFPCRRVALLVARFLLPVVFCFVCRGLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSKDLEHYLVLAWALVAVGKYHE
AAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQDYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVAL
QLDSLNDFWWARLGYARERAGDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR

Sequences:

>Translated_217_residues
MIGFPCRRVALLVARFLLPVVFCFVCRGLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSKDLEHYLVLAWALVAVGKYHE
AAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQDYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVAL
QLDSLNDFWWARLGYARERAGDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR
>Mature_217_residues
MIGFPCRRVALLVARFLLPVVFCFVCRGLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSKDLEHYLVLAWALVAVGKYHE
AAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQDYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVAL
QLDSLNDFWWARLGYARERAGDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24855; Mature: 24855

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFPCRRVALLVARFLLPVVFCFVCRGLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCH
DLEHYLVLAWALVAVGKYHEAAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
DYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVALQLDSLNDFWWARLGYARERA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIGFPCRRVALLVARFLLPVVFCFVCRGLCSQQSGLAFYRAGSYREAIRCCEEAIAQGSK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCH
DLEHYLVLAWALVAVGKYHEAAQWALEGRAVAAHDPRLIEAQAEAFCHLGRNEEALRLFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHH
DYIACAPNGARQTAAYYLMGEIYLRTSRFLHADIAFSVALQLDSLNDFWWARLGYARERA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GDYRYALQAYDRALQLNRDLADARRGRERVLRYVFRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA